DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and Tdrd5

DIOPT Version :10

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_001128213.1 Gene:Tdrd5 / 214575 MGIID:2684949 Length:1040 Species:Mus musculus


Alignment Length:1067 Identity:208/1067 - (19%)
Similarity:343/1067 - (32%) Gaps:345/1067 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 SIHNSKTPMEIAREQLAV------------RQSLAARLDAQRSVQVTPSRP----LNADAPDYTP 283
            |..:..||.::.:|.|.:            |.::...||....|.|.|...    |.| .||.:.
Mouse    21 STKDGLTPQQLEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVSVCPGGDGTVILKA-IPDEST 84

  Fly   284 KHLPLVNVTNVQVQMPGLNNTQ---KPVFVSTNPYNRANYQPAVPAAQPYVPKANPRS------- 338
            |  .:.::...|.:...:.|:.   :|...|    .|..|:..||...|.|.|:..:.       
Mouse    85 K--GIASLVAKQRRSHKVRNSMPKGRPSICS----GRVPYRGRVPPILPAVVKSELKDLLALSPV 143

  Fly   339 -----------------QYTYYN-VRMNKPINAMPP---------------------------PA 358
                             ||..|. :.|.:.:||...                           ||
Mouse   144 LLSDFEKAFARRFGRSFQYMQYGFLSMFEVLNAASDVISVEQTRAGSLLTLKKSVSEDKQRGWPA 208

  Fly   359 G----------------PHVPIQ--HFNQQANNVSLSYVPARFTPPPTPSIAQHQIP----IPAF 401
            |                ...|:.  ||:|..:|:.          ||...::..:.|    :.|.
Mouse   209 GKVFTQPFRMKQQGSYSTGFPVMKAHFSQPISNME----------PPKQVLSMAKTPTFNSVEAS 263

  Fly   402 R---TTSLT-VGLTYDVVISYVENG----PYL-----FWVHLKSSDHDLSTMMGQIERTKLKALA 453
            |   |..|. :..|:..||:.:..|    |.|     |.|........:|.::|:.|.| .|...
Mouse   264 RLNHTEKLNQLESTFKSVIAQIGPGGTVDPELKRKIQFVVSKFPQGLFISKLLGEFELT-FKEQL 327

  Fly   454 QAPELGTACVARFSEDGHLYRAMVCAVYAQRYRVVYVDYGNSELLSASDLFQI-------PPELL 511
            ...:||...|....  |.|...:......:|..::..|.....|.|...|..:       |.:..
Mouse   328 SPKQLGFLNVTELV--GALSDILRVEFSEERQDLLVFDADLKPLPSGGPLSSVRNSCLVQPDKKT 390

  Fly   512 EIKPFAFRFA-----------------LAGTKEIEPIDDSMKRIFKK-SAIYRNFELTVQA---- 554
            |..|:....:                 |...||.|      ::|:|| :.:.:..:|.|:.    
Mouse   391 EANPWTSSLSRNSLSTVAVKKTTWDCPLKNQKEPE------QKIYKKPNLVVKPLQLQVETNKPQ 449

  Fly   555 -----------PESVGSMQTCHLNQNGTNMLELLRQLKNSRQSYKKAEQLENDDAVEIRFIDSPS 608
                       |::|.:.:.|.|....|:.|.                      .|.:.:|.|||
Mouse   450 LSLSVANHDIPPDAVRAKKLCRLPPLDTSTLV----------------------GVFVEYIISPS 492

  Fly   609 NFYVQKVANIGK--FEQLMDEMFSYYNANQRVPDQLIL-------GAPCIVKC--DQEWYRAEIL 662
            .||::..:....  .|.:|.||...| :||.|.|:.|:       |..|.||.  |:.|||..|.
Mouse   493 QFYIRIYSRDSSELLEDMMIEMRRCY-SNQLVSDRYIMPEYFIQPGHLCCVKISEDKWWYRVIIH 556

  Fly   663 RV--DDSVIVRHVDFGYEQNVKRHLIGHIAEKHLEMPRQAIKCCLKGFENSE------------- 712
            |:  ...|.|.:.|||....|::..:..:...:.::|.|||.|.|.....:|             
Mouse   557 RILGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPAEEHWTARAILHFQK 621

  Fly   713 ---------LSEDKITDQFEMLAEESNIRRRTFSVRIFRIE-----------PDGLNVVNLLAKN 757
                     :.::.|.....:...:::.....:...:.|.|           ..|....|..|..
Mouse   622 LCGLKPLVGVVDEYIDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVCRENAPSKGFRDFNPPALY 686

  Fly   758 LNVMKK----LYKLSMPFEQ-YLS-----LEKGQFNANNTRAESVISS---ELNKSHILNSTSIG 809
            .|....    |..|..|.:| ||:     |::.|.:.|:.:..|.:.|   ||.|...|:|.   
Mouse   687 TNASSAGDMVLTDLGHPAQQHYLNEDQEILQQAQQDINDGKCISYLKSAPKELLKDSKLSSL--- 748

  Fly   810 ETENRLQE-------QEKEQQQKKVDVRQQQLAVEIPQAVKSVSGSKNSTD-WDKR------SST 860
            :|....:|       |.|:.:::..|        |:|..:..:.......| ||:.      ...
Mouse   749 KTHKSCEEDPRWSILQPKDLKEENED--------EVPTGMPCLESVTIGDDVWDENWLPLQAKMG 805

  Fly   861 SAGSKDS---------KRQQQQ--QIQRIDRHLDFSCETQSTGSYSSGMSSPRKGNRQQNGRTPI 914
            .|||..|         |:|.|.  ::.:.|.....|.:.........|:::..||..    .|| 
Mouse   806 KAGSPASQLFTSNLVGKKQYQTGGEMAQKDWCFSTSKDIWDDSWQPLGLANDVKGGI----HTP- 865

  Fly   915 QSPRHNEK--------QEAKKNARFSNSESPRRSR------DGQQGNQRSQNAPQGYAQKPQRQK 965
            :.|...||        |:........:|..|:...      ..||..:|||:.|........|..
Mouse   866 EGPIAQEKNTSTTRIQQQPDLQYPLDSSTLPKLEEFYISLIKSQQSAERSQSEPASIQTHAGRAA 930

  Fly   966 STL--------------DGNISSKRSSGVGSDIASSSSESVAAAKPEKYVSLDKPYALQEMKTPS 1016
            |..              .|::.|...|....|:::|.:|  |.||.:...::|:           
Mouse   931 SKALSSTPAVGDSPENHSGSVESSPGSLKKEDVSNSRAE--ATAKDKSQGAIDQ----------- 982

  Fly  1017 KEAASLSWWLSP----FQFYIVPKSVS 1039
                 ||:.|||    .|...:|:|.:
Mouse   983 -----LSFILSPQHQISQKLYIPRSTA 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 TUDOR 411..524 CDD:425754 27/145 (19%)
TUDOR 595..707 CDD:425754 39/124 (31%)
TUDOR 1016..1132 CDD:425754 8/28 (29%)
TUDOR 1309..1425 CDD:425754
TUDOR 1620..1727 CDD:425754
TUDOR 1795..1906 CDD:425754
TUDOR 1980..2089 CDD:425754
TUDOR 2163..2277 CDD:425754
TUDOR 2347..2458 CDD:425754
Tdrd5NP_001128213.1 LOTUS_1_TDRD5 4..98 CDD:193599 17/79 (22%)
LOTUS_2_TDRD5 127..196 CDD:193589 9/68 (13%)
LOTUS_3_TDRD5 292..365 CDD:193590 16/75 (21%)
Tudor_TDRD5 484..601 CDD:410490 37/117 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..891 8/38 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..975 15/64 (23%)
Blue background indicates that the domain is not in the aligned region.

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