DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tud and tag-250

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_001021188.2 Gene:tag-250 / 176113 WormBaseID:WBGene00016203 Length:626 Species:Caenorhabditis elegans


Alignment Length:628 Identity:134/628 - (21%)
Similarity:227/628 - (36%) Gaps:168/628 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1843 GLIVAALFEDDELWYRAQLQKELPDSR---YEVLFIDY--GNTSTTSKCLMLSEEIASLPSLSKK 1902
            ||:.:.:|  |.:.....:.:|:.:.|   ||::..::  |..:|     .|||:... ..:||.
 Worm    22 GLVPSTIF--DRINSDMDVSEEMEEIREVLYEMIKTNFPMGVAAT-----HLSEKYHE-EFVSKG 78

  Fly  1903 CSLQLPDAYISWSPEAEAKFAELTGEGELVF-----TTQLLKPGQDHVTIDLL-LDGENIIDRLL 1961
            ...:||:.:|.....||...|:..|...::|     |:...:|..:.|.:.:: .|.|...|.|.
 Worm    79 LGRELPEDWIQQVTAAEEFEAQTRGPITILFVRLSNTSSFKRPPINSVNVRVISTDREPTADELK 143

  Fly  1962 PLCQRKE------PKEASKESLAV---TTKAIITHVENTSRIYLQFSEKDSLMDIICEKLNGSKL 2017
            .:.||||      .|..|::|:|:   :|.:|: :.::..|.:::....|...:.|...|.....
 Worm   144 KIKQRKENEPTEHAKTLSQQSVALKEGSTVSIV-YADSPKRFFIRALADDDQYEKIGTTLAEIYA 207

  Fly  2018 QPKTEKAAVDDMCVVQFADDLEFYRSRILEV-------LEDDQ---YKVI-------------LI 2059
            | :|..:|:|.             |..|.|:       |:|..   ::||             .:
 Worm   208 Q-ETPPSALDS-------------RVAIYEIVAGGAYALQDSNGTWFRVIAKQPPQSGQVMCHFV 258

  Fly  2060 DYGNTTVVDK-----LYELPQEFTLIKPVAEICSM---------EPSAIFEKNK----------- 2099
            |.|   |.:|     :..||   ..:.||..|.||         |..::...||           
 Worm   259 DVG---VCEKFPVAAIRLLP---PAVHPVMSIGSMAREVRMDVSEEESLRLNNKFVDLTFETKDD 317

  Fly  2100 ------ALTLTTFDAL---------LDSCKGVVAVEFVNKSASPPVVRLTTKDKRSLKIYEHLQK 2149
                  .|||:.||:.         |.|..|:...||:.|.:.  ||||:|..|.:         
 Worm   318 GIQVPINLTLSKFDSSDSESLPVVDLQSSDGLSITEFLKKPSG--VVRLSTPTKTT--------- 371

  Fly  2150 LVQAELKLIQKRNENSECIISYGNSPKSFYVQMKHNSA------------DLDLIVKTLQSLKKE 2202
               :.:........:..|:.....:.:...|.....||            |:.|...:|..:...
 Worm   372 ---SPITPASASTSSLTCLFDKPATIQPMTVAQMPMSAFPANAIFAAGPTDISLRQLSLDPMPDY 433

  Fly  2203 KLKKLIDPTTNSNGVCYSQED-ACYY-----------RCSIKSVLDPSQGFEVFLLDYGN-TLVV 2254
            ...||.|.....:....|..| ..:|           :|...|.:| .|.:.|:|||.|. ..|.
 Worm   434 MYAKLKDECALPDSQLESSPDFGGFYAAFIDDRWERVQCIRASKID-KQAYCVYLLDVGAFQYVR 497

  Fly  2255 PEVWQLPQEIEPIPS-LALHCQLSKI-PM---DVSDEKLEEAFAALLEQHFGELYEI-TTQPNED 2313
            .|..:......|... |...|::..| |:   :|...:..||.....|...||...: .|||...
 Worm   498 KEAMRRLNSTSPFKKMLMFKCKIGGIKPVAGGEVWSRESHEAVREFFEAACGEPVVVEPTQPGWS 562

  Fly  2314 ETKPLIA------ELRINY--KDFVQELVSTVTGVQKPLEAEL 2348
            :.|.|.|      |.|::.  :|....|::  .|:..|:.|.:
 Worm   563 QWKQLNAPAVPTCEARLSCCGRDIGDWLIA--CGLALPINAPI 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607
TUDOR 406..524 CDD:278965
TUDOR 454..510 CDD:197660
TUDOR 591..707 CDD:278965
TUDOR 644..693 CDD:197660
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965
TUDOR 1666..1711 CDD:119391
TUDOR 1791..1906 CDD:278965 15/67 (22%)
TUDOR 1843..1886 CDD:119391 10/47 (21%)
TUDOR 1975..2089 CDD:278965 28/144 (19%)
TUDOR 2028..2069 CDD:119391 10/63 (16%)
TUDOR 2159..2277 CDD:278965 27/143 (19%)
TUDOR 2210..2264 CDD:197660 14/66 (21%)
TUDOR 2345..2458 CDD:278965 1/4 (25%)
TUDOR 2396..2437 CDD:119391
tag-250NP_001021188.2 TUDOR 167..293 CDD:278965 28/146 (19%)
TUDOR 222..277 CDD:197660 11/60 (18%)
TUDOR 402..522 CDD:278965 25/120 (21%)
TUDOR 451..508 CDD:197660 14/57 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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