DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and tdrd6

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:XP_031758870.1 Gene:tdrd6 / 105948404 XenbaseID:XB-GENE-5969988 Length:2499 Species:Xenopus tropicalis


Alignment Length:2572 Identity:475/2572 - (18%)
Similarity:845/2572 - (32%) Gaps:924/2572 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 AQPYVPKANPRSQY-TYYNVRMNKPINAMPPPAGPHVPIQHFNQQANNVSLSYVPARFTPPPTPS 390
            |:|: |.|:.||.. ||:              ||.|...|.....:...|....|.....|....
 Frog   206 AKPF-PAASFRSLIDTYF--------------AGGHSSAQTKTFPSVQPSAQSNPMAQVNPRRAW 255

  Fly   391 IAQHQIPIPAFRTTSLTVGLTYDVVISYVENGPYLFWVHLKSSDHDLSTMMGQI----------- 444
            :..:..|       ...||:...|:::.|.| |:..:..|:|..|::..:...:           
 Frog   256 VLDYFYP-------QFQVGVIEPVLVTEVSN-PHRIFCQLRSLSHEVQRLSDSMHHFYELQSGCG 312

  Fly   445 ERTKLKALAQAPELGTACVARFSEDGHLYRAMVCAVYAQR--YRVVYVDYGNSELLS-------A 500
            ||..::.|..    |..|..|.| |||.||:::...|..:  ..|::||:|..:::|       |
 Frog   313 ERNYIQPLIP----GQPCACRGS-DGHWYRSLLQEYYPDKKLAMVIHVDWGRKDIVSMNCLRTLA 372

  Fly   501 SDLFQIPPELLEIKPFAFRFALAGTKE----IEP-IDDSMKRIFK------KSAIYRNFE----L 550
            :|.|::|       ...|..:|.|..:    .:| |...::.:|:      |...|.::|    :
 Frog   373 ADYFRMP-------VVTFPCSLYGVSDGGVAWDPAIIMELRNMFQGKQFSAKIDFYNSYEHMYVV 430

  Fly   551 TVQAPESVGSMQTCHLNQN---GTN---------MLELLRQLKNSRQSYKKAEQ----------- 592
            |:...:.|        |.|   ||.         ...|.:.|..|::..|...|           
 Frog   431 TLYGDDGV--------NLNCVFGTRAQSFSFSQAQKPLSQDLGESQEDVKSLPQTPPEAFYVPTV 487

  Fly   593 ------LENDDAVEIRFIDSPSNFYVQKVANIGKFEQLMDEMFSYYNANQRVPDQL---ILGAPC 648
                  :.....|.:.|:..||||:::...|..|:.::|:::.:.|:...::...:   :.|..|
 Frog   488 PVAELNISTFYDVLVEFVADPSNFWIRTGENATKYSEMMEQIAALYSKASKLDGIMTTPMAGQLC 552

  Fly   649 IVKC-DQEWYRAEILRVDDSVI-VRHVDFGYEQNVKRHLIGHIAEKHLEMPRQAIKCCLKGFENS 711
            ..|. |..:|||||:.:...:: |..:|.|..:.|..:.:..:..:..|||..||.|        
 Frog   553 CTKFKDDRFYRAEIVAIKGKMVEVYFIDHGNTELVDWYNVKKLPAELGEMPGLAIYC-------- 609

  Fly   712 ELSEDKITDQFEMLAEESNIRRRTFSVRIFRIEPDGLNVVNLLAKNLNVMKK---LYKLSMPFEQ 773
                 .:.|.:.:                    .|..:...:||..:.|:.|   :|.||....:
 Frog   610 -----SVADTYPL--------------------GDSWSPEAILAFKMAVVDKRLVIYVLSKEHNK 649

  Fly   774 YLSLEKGQFNANNTRAESVISSELNKSHILNSTSIGETENRLQEQEKEQQQKKVDVRQQQLAVEI 838
            |: :|.    .:|:|.|              ..|:|:..:.:...:.|:                
 Frog   650 YI-IEV----LDNSRIE--------------QRSVGKILSAVGHAKYEE---------------- 679

  Fly   839 PQAVKSVSGSKNSTDWDKRSSTSAGSKDSKRQQQQQIQRIDRHLDFSCETQSTGSYSSGMSSPRK 903
               |:.|:....:|            .|..|:.|||.                    ||      
 Frog   680 ---VEPVAQHPGTT------------SDIDRKMQQQF--------------------SG------ 703

  Fly   904 GNRQQNGRTPIQSPRHNEKQEAKKNARFSNSESPRRSRDGQQGNQRSQNAPQGYAQKPQRQKSTL 968
                           |..|..:...|                                 |||   
 Frog   704 ---------------HLNKDISLLKA---------------------------------RQK--- 717

  Fly   969 DGNISSKRSSGVGSDIASSSSESVAAAKPEKYVSLDKPYALQEMKTPSKEAASLSWWLSPFQFYI 1033
                          ::..|..|:    |.|.|    .|:..|..:..:.....:|..::|..|:.
 Frog   718 --------------EVVCSVQEN----KSEPY----SPFEDQFFEPGTTIEVVVSCIINPSLFWC 760

  Fly  1034 VPKSVSAKYDNIMRDMREFYRQKQHQPLQLKVGST-------VVVRQRKDNAILRATV------- 1084
            .....|||.:.:|..:         |.:.|..|.:       .:.:...|....||.:       
 Frog   761 QNALHSAKLEKLMAKI---------QDICLNAGCSYERGACACLAKSSCDGRWYRAFIVNEMPAG 816

  Fly  1085 -TACNHMMRKYRVFCVDTGSLITVTSEDIWQLEQRFADPPCMAHRCSFHSVVT-------NYDPL 1141
             .:.:|:    .|..||.|...||:.:|:..:|.........|.:||.::::.       .:|.:
 Frog   817 KASSDHV----EVLFVDYGIRETVSLKDLRCMESELFGLKAQAFKCSLYNIIAPDGENPFEWDAI 877

  Fly  1142 YIVDRMETFVPVNAKVDCEFVSKEKSNQGSNTSSTCSY------TVNIFVNGASLRDMLVKAEFL 1200
                   |.:..|..||.  .||:.:.......:|.|:      .|::|...||:..:||:....
 Frog   878 -------TTLSFNRFVDS--FSKKTTEFKCTFFATASFKKELFNVVDVFTPFASICKLLVEQGHA 933

  Fly  1201 TEVAPEIRVNLLAGQQIRGKFTSIRDMTSFKVQFDYGNNVNFLCTYDDAKFVKSNPNLARRFKEF 1265
            .:::..   .|:...|::..:.|..|:   |:    |.......||.::..            ||
 Frog   934 KQLSHR---TLVPSVQLQTYYYSTHDI---KI----GGEEEVYITYVNSSL------------EF 976

  Fly  1266 YEGKSFALNVKNVCENNIVHLRPVMPLFMEDRRSFICPYPVVLSSFQALVVYTAKPYRVYVQPQA 1330
            |            |:                           ||.              ..:...
 Frog   977 Y------------CQ---------------------------LSR--------------NTETMD 988

  Fly  1331 IVPSMQTLLDNMYEHYKAKGDSLKKFDV--GQICAVRSSDGNWYRARISGKDSNAACF------- 1386
            ::.|..|.:.|          .:|||.:  |.:|..:.||..|||           ||       
 Frog   989 MIASATTRVCN----------EVKKFQLSPGSLCLAKFSDQQWYR-----------CFTNFNKNS 1032

  Fly  1387 -EVFYIDYGNTEEIKRDDIKALDAKFYE--HASGFAVEI------------------NLPIGRP- 1429
             :||::||||||::.::::..:.:..||  |....|::.                  ||.:.:| 
 Frog  1033 TDVFFVDYGNTEKLTKEELLPIPSDAYELLHFPMQAIKCSLSDIPDTIPREVVLWFENLILDKPL 1097

  Fly  1430 -------SNDTKLKARISEILEEKVVTIKSIEVR----------------RSHLIADV------- 1464
                   ..|.||   |.|:.:.......||:.:                :.|.:.|:       
 Frog  1098 KALIVAKETDGKL---IVELYDGSQQINSSIKAKLGLKNPRTEGYFGNAEKRHQLNDLDKGGRPD 1159

  Fly  1465 --------------ILEN-NQSVIDLLKAEKLVPGKDLDYMRKQMEKGKSRTYEYIETVDLTLDE 1514
                          .|:| :|:.....|:...| .|:.|...::.....||.|         :.:
 Frog  1160 SAFKLYNQGSKFSSDLDNHSQNGFTHQKSASFV-AKERDQFEQKPNLRTSRPY---------IQD 1214

  Fly  1515 EEDKGRKETVSKSGSANASPKKK-QHNDKDREPKKSKPAEPARTVAPQPVALKTPSPVPAEPAPV 1578
            .|....::.:|:||.|   |.|. :...||||..:.:|            .||| |.:.::...|
 Frog  1215 REVYSVRKNISQSGYA---PHKTGEFRSKDREALEQRP------------NLKT-SGMYSQGREV 1263

  Fly  1579 PKPATPVPEVVEVPEINPTVREAAAESKQAPAQEDPYKDLDCVVLSHCDNPAQFYVHPIDQLSKL 1643
                              ::.:..:.|...|.:...::..:..|..|..||..|..:  :|.||:
 Frog  1264 ------------------SMSQNGSNSGFPPKKTGGFRSKEREVSEHKQNPDAFKGY--NQESKM 1308

  Fly  1644 NQLHENLQIVSPSLPQLMNVVNGADCVSMYSVDKCWYRAKIIDAELMVLLFIDYGNTDCVSDATD 1708
            :             |||.   ||:...:.:|.:                           ||.:.
 Frog  1309 S-------------PQLR---NGSQMEASWSSE---------------------------SDRSS 1330

  Fly  1709 IKESMWSHIEPFCLPCALPIRPKGTADWVDAANGIFNESYSKVPRLEYLTQGDHYTTSYVNMYID 1773
                  .|            :|:..|.  ......|.|..| :|.|..|:               
 Frog  1331 ------EH------------KPEINAS--QQRRSTFQECKS-IPPLTKLS--------------- 1359

  Fly  1774 GEDVAKKLIADGFARPLEYLASGCSCYISHVNGICDFFIQLERDSKALELIELYLRKKDTLKPLE 1838
              |:.|:.|..||.         .|.||||.|.:.||::|:.:|::...:.|:...:|   ||.:
 Frog  1360 --DLPKQNITPGFK---------SSVYISHTNTLSDFYVQIAQDTELSNISEILNNEK---KPSD 1410

  Fly  1839 GFEK-----GLIVAALFEDDELWYRAQLQKELPDSRYEVLFIDYGNTST--TSKCLMLSEEIASL 1896
            ..::     |.::.|.||||.|:|||.:.::..|. .:|.:||||||.|  .|:...|...::|.
 Frog  1411 RLDEKDVNLGDLICAFFEDDGLYYRAVITEKHSDG-LQVQYIDYGNTLTIPASQIYKLPPSLSSA 1474

  Fly  1897 PSLSKKCSL----------QLPDAYISWSPEAEAKFAELTGEGELVFTTQLLKPGQDHVTIDLLL 1951
            |.:|..|:|          .:.|..:        ||:|.||:.||  :.:.::.......: :|.
 Frog  1475 PVMSIFCALDKCTTAACEQNMDDLMV--------KFSERTGDLEL--SCEFVQCNNLKWNV-ILC 1528

  Fly  1952 DGENII--------DRLLPLCQRKEPKEASKE------------SLAVTTKAIITHVENTSRIYL 1996
            |.:..|        |.||.....:||...|::            :|....:|..:.|::....:.
 Frog  1529 DDQGCINDLFISASDPLLNPPSLEEPDVTSEQLNGVSHYVWNLPALGERVEAYASAVDSPEHFWC 1593

  Fly  1997 QF--SEKDSLMDIICE----KLNGSKLQPKTEKAAVDDMCVVQFADDLEFYRSRILEVLEDDQYK 2055
            |.  ::.|||...:.|    .::..|...:.|   |...|.|.:::|..:||:.:.:: |.||..
 Frog  1594 QLVTADVDSLAVKVQEAGERSVHDGKFSTEIE---VGSPCNVIYSEDNHWYRAAVTKI-EADQVT 1654

  Fly  2056 VILIDYGNTTV--VDKLYELPQEFTLIKPVAEICSM------------EPSAIFEKNKALTLTTF 2106
            |..:||||..:  ::::..||.:...|...|..||:            :.:..|.:|....|...
 Frog  1655 VRFVDYGNEEMLHLEQVRRLPADLATIPAQAFSCSLAGFNLSEGCWNSDANTFFYENVTEGLLVI 1719

  Fly  2107 DAL----LDSCKGVVAVEFVNKSASPPVV------------RLTTKDKRSLKIYEHLQKLVQ--- 2152
            ..|    |..||  :....||.|.:...|            .:.|....||    |.:::::   
 Frog  1720 SVLHIQELGPCK--IPQASVNVSYNGENVNTKMRQFWQDSNEIPTPFLESL----HAEEIIKDNT 1778

  Fly  2153 ---AELKLIQKRNENSE--CIISYGNSPKSFYVQMKHNSAD---LDLIVKT-LQSLKKEKLKKLI 2208
               ..::.:..::|.||  |......:|.   |...:::||   :..|.:| |::|......:..
 Frog  1779 IPSQAVEDVADQSEQSEEPCASELTETPT---VPTMYSNADGEEVTAIDETKLEALPLSSTDEAA 1840

  Fly  2209 DPTTN------------------SNGVC----------------YSQEDAC--YYRCSIKSVLDP 2237
            :.|.|                  |:..|                .:.||.|  |...:||.... 
 Frog  1841 ESTENTDVDLMRTECLLPEIQKSSDLSCLELTLDEDVPGSAVTPLAPEDLCIDYDESNIKESYS- 1904

  Fly  2238 SQGFEVFLLDYGNTLVVPEV--WQLPQEIEPIPSLALHCQLSKIPMDVS-----DEKLEEAFAAL 2295
                ::..:|.|......::  |......:.|.|..:   :..:|:|..     .|..||:.|:.
 Frog  1905 ----DITAMDQGELHHTEDIDLWTPAAHDQEIASSEI---IDNVPIDKECDYSVQEPTEESSAST 1962

  Fly  2296 -LEQHFGELYEITTQPNEDETKPLIAELRINYKDFVQELVSTVT--------------------- 2338
             ||:.........|: |.|..:|..|.|:...::::....|||.                     
 Frog  1963 GLEEGPAPEKNAFTE-NNDGLEPEAANLQSKGEEYLVPEESTVAVCESEDFEPEVDVDLPRKENE 2026

  Fly  2339 ----------------GVQKPLEAELH---------------------NCVVVQFDGPMSFYVQM 2366
                            |:..|.||..|                     .|....||         
 Frog  2027 DLPAYTYIPIPEDDGDGLGSPKEATSHEIGDAEGLGEQNQELLDHTISECTNDDFD--------- 2082

  Fly  2367 ESDVPALEQ---------------MTDKLLDAEQDLPAFSDLKEGALCVAQFPEDEVFYRAQIRK 2416
              |:|:.||               ..|...|.:.|:.|.....:..:.:.:.|..|..||:...|
 Frog  2083 --DLPSKEQEGIPLHSDADTDFAGTEDVPRDMKGDIEATGSQNKEDVTLGEDPATETEYRSYFLK 2145

  Fly  2417 VLDDGKCEVHFIDFG---NNAVTQQFRQLPEELAKPARYSRHCELDASTISKCDAALLQSFIDTR 2478
            ..|..:......||.   .|.|.:..    .::::|.......|....|::..|...|:..:|. 
 Frog  2146 AEDVDRPSQEHKDFAGQEENPVAEYI----NDISEPEFADLQSEEQGDTVTYTDTPFLEGGVDD- 2205

  Fly  2479 FSETFQVEILATKGTGTHVVRLFYQSKNISEKLQECQ 2515
            |..|   |..:...|..||..   ..::::.:.||.|
 Frog  2206 FGST---EAKSRDNTYEHVTE---DVEDLNTENQESQ 2236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607 15/70 (21%)
TUDOR 406..524 CDD:278965 33/137 (24%)
TUDOR 454..510 CDD:197660 19/64 (30%)
TUDOR 591..707 CDD:278965 30/137 (22%)
TUDOR 644..693 CDD:197660 13/50 (26%)
TUDOR 1012..1132 CDD:278965 25/134 (19%)
TUDOR 1062..1119 CDD:197660 14/71 (20%)
TUDOR 1309..1425 CDD:278965 29/145 (20%)
TUDOR 1354..1411 CDD:197660 20/66 (30%)
TUDOR 1614..1727 CDD:278965 17/112 (15%)
TUDOR 1666..1711 CDD:119391 4/44 (9%)
TUDOR 1791..1906 CDD:278965 40/131 (31%)
TUDOR 1843..1886 CDD:119391 20/44 (45%)
TUDOR 1975..2089 CDD:278965 29/133 (22%)
TUDOR 2028..2069 CDD:119391 13/42 (31%)
TUDOR 2159..2277 CDD:278965 27/161 (17%)
TUDOR 2210..2264 CDD:197660 13/91 (14%)
TUDOR 2345..2458 CDD:278965 25/151 (17%)
TUDOR 2396..2437 CDD:119391 10/43 (23%)
tdrd6XP_031758870.1 Tudor_SF 24..153 CDD:413384
Tudor_TDRD6_rpt2 258..389 CDD:410492 34/150 (23%)
Tudor_SF 497..630 CDD:413384 33/165 (20%)
Tudor_SF 734..863 CDD:413384 26/141 (18%)
Tudor_SF 950..1073 CDD:413384 39/215 (18%)
Tudor_SF 1371..1483 CDD:413384 39/124 (31%)
Tudor_SF 1578..1717 CDD:413384 31/142 (22%)
MDN1 <1950..2492 CDD:227596 56/310 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10834
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I3885
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232447at33208
OrthoFinder 1 1.000 - - FOG0002918
OrthoInspector 1 1.000 - - otm48975
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4998
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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