DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and tdrd7b

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_001340858.1 Gene:tdrd7b / 100004703 ZFINID:ZDB-GENE-150109-14 Length:1085 Species:Danio rerio


Alignment Length:1201 Identity:228/1201 - (18%)
Similarity:396/1201 - (32%) Gaps:436/1201 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1465 ILENNQSVIDL--LKAE------KLVPGKDLDYMR-----------KQMEKGKSRTY-------- 1502
            :|::::|.:.|  |:.|      :|:|.|.|.|:.           .:::||:|...        
Zfish    14 VLQSSKSGLSLSDLQVEYKDLTGELIPYKQLGYVTLDALLHSMPSIVKLDKGQSGEVMCHATTGN 78

  Fly  1503 EYIETVDLTLDEEEDKGRKETVSKSGS-----------------ANASPKK-------------- 1536
            |......|.       .|:.|..|:|.                 .||.|:.              
Zfish    79 EMAHITKLA-------ARQRTAKKTGRPQVVNCQMRVKPAAPLVLNAKPRTSLRQPDHRGRLGRG 136

  Fly  1537 -----------------------KQHNDKDREP--KKSKPAE--------PAR-------TVAPQ 1561
                                   :.||.....|  |.|.|:|        |:|       .:...
Zfish   137 GGRGHGDTRTGCMRDPQLDGKGGRPHNTPPNTPSRKPSLPSERPEKRMTLPSRFQKEVHAHILRN 201

  Fly  1562 PVALKTPSPVPAEPAPVPKPATP-----VPEVVE---------------VPEINPTVREAAAESK 1606
            |..:..||.:.....| |||..|     .|::|:               |.::....||...:..
Zfish   202 PQHINVPSNLNENTTP-PKPRLPHSAPYSPKLVQSRLQEVLNKHSNGLWVSKLPQLYREHYKQDL 265

  Fly  1607 QAPAQEDPYKDLD-----CVVLSHCDN-PAQFYVHPIDQLSKLNQL---------HENLQIVSPS 1656
            .:.|    .|:|:     |.|...|.: |.:..::|..:.|::...         |:..|...||
Zfish   266 PSEA----LKELENWTHICTVEKPCSSKPQELLLYPAKETSQITPTPTHDRSPSHHKKPQTQRPS 326

  Fly  1657 LPQLMNVVNGADCVSMYSVDKCWYRAKIIDAELMVLLFIDYGNTDCVSDATDIKESMWSHIEP-- 1719
            |....|.......:|.....|.        .||:    :.|.:            .:|:|..|  
Zfish   327 LTAKSNTPESPKALSPDLKQKL--------GELL----LKYSS------------GLWAHALPKL 367

  Fly  1720 -----------FCLP--------CAL----PIRPKGT---ADWVDAAN----GIFNESYS----- 1749
                       |.|.        |.:    |..||..   |..|:..|    |:..:...     
Zfish   368 YQDTYKCKLPEFVLDQLTLLSDICTIDYPVPDNPKRAILYAKVVEDENRNQSGLAGQEMKLERRL 432

  Fly  1750 --------KVPRLEYLTQGDHYTTSYVNMYIDGED---VAKKLIADGFARPLEYLASGCSCYISH 1803
                    .:||:||.:.          :.:|..|   |..:.|.:|:::..|.|..        
Zfish   433 SSQTVPPLVIPRVEYPSV----------LVVDASDTNCVILRYIGEGYSKAQEKLED-------- 479

  Fly  1804 VNGICDFFIQLERDSKALELIELYLRKKDTLKPLEGFEKGLIVAALFEDDELWYRAQLQKELPDS 1868
                              |:.|.| |:.:|...|.....|.:.|...|:::...|||:.:.:.| 
Zfish   480 ------------------EMREFY-RQDNTKMALRSPSPGQLTAVGAEEEDDIIRAQVCEVMAD- 524

  Fly  1869 RYEVLFIDYGNTSTTS--KCLMLSEEIASLPSLSKKCSLQLPDAYISWSPE-AEAKFAELTGEGE 1930
            :.:|.::|:|.:...|  |...|:|:...||..:.||.|.   ...|:|.| |..|..|....|:
Zfish   525 KVKVYYVDHGFSEVISIRKLFELNEKFYRLPFQATKCKLA---GLESFSQEQAVLKKLESIATGK 586

  Fly  1931 LVFTTQLLKPGQDHVTIDLLLDGENIIDRLLPLCQRKEPKEASKESLAVTTKAI----ITHVENT 1991
            ::. .::|:  ::.:.:.:|.|.....|..:.....|..::.|.||......|.    :|.|.:.
Zfish   587 ILL-AEILE--REDMPLVVLYDTSQDDDVNINAACMKALQDRSLESPLKVNSAYMNVSVTSVCSD 648

  Fly  1992 SRIYLQFSEKD-SLMDIICEKLNGSKLQPKTEKAAVD-----DMCVVQF------ADDLEFYRSR 2044
            ..||.|...:. :.::.|.||.........|.::.|.     ..|:.::      .:....:.||
Zfish   649 GTIYCQVPSRGLTKLNEILEKTENYFHSQVTSESLVSRPFCGKNCLARYKGKWSRVEITNLHGSR 713

  Fly  2045 ILEVLEDDQYKVILIDYGNTTVVD--KLYELPQEF--TLIKPVAEI------------------- 2086
            :|::|        .:|.|....|:  :|.|:|...  .||...|:.                   
Zfish   714 VLDIL--------FVDVGVQASVEVIELREIPPPLLRDLISTPAQALKCCLAGLPVSVGLWTPDA 770

  Fly  2087 -------------CSMEPSAIFE------------KN---------------------------- 2098
                         ||::.:.:.|            ||                            
Zfish   771 VQWLRDTVLHISDCSLKIAKVDETKRLAHVYLFTSKNFHDTSCSLNQQLADSDLWNHQKDVFLSS 835

  Fly  2099 ----KALTL--TTFDALLDSCKGVVAVEFVNKSASPPVVRLTTKDKRSLKIYEHLQKLVQAELKL 2157
                |:|.:  .|..:.|.:.:|..|:. ..|..|||   |.:|...:....|.|......||..
Zfish   836 RGPLKSLNVPTATQTSSLKTDRGDKALH-TPKKTSPP---LGSKSTPAGSPPERLSLPPALELPE 896

  Fly  2158 IQKRNENSECIISYGNSPKSFYVQMKHNSADLDLIVKTL---------QSLKKEKLKKLIDPTTN 2213
            |   .:|.:..:|....|..|.:|...:...|.:::..:         ::||.||          
Zfish   897 I---GQNMDVFVSVACHPGHFVLQPWQDMYKLVVLMGEMILHYNKMEEKALKVEK---------- 948

  Fly  2214 SNGVCYSQEDACYYRCSIKSVLDPSQGF-EVFLLDYGNTLVV--PEVWQLPQEIEPIPSLALHCQ 2275
             |.||.::.:..:||..:|.||  :.|. .||.||||...:|  .::..|.||...:|..|:..|
Zfish   949 -NQVCAAKVENNWYRVLVKGVL--TNGLVSVFQLDYGKHELVSGTKLRPLTQEFCQLPFQAITAQ 1010

  Fly  2276 LSKI-PMDVSDEKLEEAFAALLEQHFGELYEITTQPNEDETKPLIAELRINYKDFVQE------- 2332
            |:.: |...|:|      |:::.:            |..|.|||:|:|     :.|||       
Zfish  1011 LAGLKPRQWSEE------ASIVFR------------NHVEKKPLVAQL-----ESVQEASQPWER 1052

  Fly  2333 --LVSTVTGVQKPLEAELHNCVVVQFDGPMS 2361
              ::..|...|:..:..||: ::.:|...|:
Zfish  1053 KVMIYLVDTSQEERDIWLHD-IMAEFTDEMT 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607
TUDOR 406..524 CDD:278965
TUDOR 454..510 CDD:197660
TUDOR 591..707 CDD:278965
TUDOR 644..693 CDD:197660
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965 25/152 (16%)
TUDOR 1666..1711 CDD:119391 5/44 (11%)
TUDOR 1791..1906 CDD:278965 26/116 (22%)
TUDOR 1843..1886 CDD:119391 11/44 (25%)
TUDOR 1975..2089 CDD:278965 28/165 (17%)
TUDOR 2028..2069 CDD:119391 8/48 (17%)
TUDOR 2159..2277 CDD:278965 32/129 (25%)
TUDOR 2210..2264 CDD:197660 18/56 (32%)
TUDOR 2345..2458 CDD:278965 4/17 (24%)
TUDOR 2396..2437 CDD:119391
tdrd7bNP_001340858.1 LOTUS_1_TDRD7 4..91 CDD:193600 16/83 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..183 10/70 (14%)
Retinal <160..342 CDD:330657 37/186 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..228 8/28 (29%)
LabA_like_C 232..297 CDD:326367 11/68 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..341 8/43 (19%)
LOTUS_3_TDRD7 341..408 CDD:193588 14/90 (16%)
TUDOR 442..565 CDD:306940 36/163 (22%)
TUDOR 636..758 CDD:306940 25/129 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 843..888 12/48 (25%)
TUDOR 897..1013 CDD:306940 34/131 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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