DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pu and cat-4

DIOPT Version :9

Sequence 1:NP_726038.1 Gene:Pu / 37415 FlyBaseID:FBgn0003162 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_505710.1 Gene:cat-4 / 179472 WormBaseID:WBGene00000298 Length:223 Species:Caenorhabditis elegans


Alignment Length:234 Identity:146/234 - (62%)
Similarity:175/234 - (74%) Gaps:21/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LKTNGSSPDSDGTQPKTPLTPRTSTTPGHEKCTFHHDLELDHKPPTREALLPDMARSYRLLLGGL 155
            |.::.:|..|:  ..|..:..|..|.|           :.||        |..|..:|:.::..:
 Worm    11 LSSDAASVGSE--DDKVEMKKRNGTIP-----------KEDH--------LKSMCNAYQSIIQHV 54

  Fly   156 GENPDRQGLIKTPERAAKAMLYFTKGYDQSLEDVLNGAVFDEDHDEMVVVKDIEMFSMCEHHLVP 220
            ||:.:||||:||||||||||:.||||||..|:::||.|||||||||||:||||||||:|||||||
 Worm    55 GEDINRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFDEDHDEMVIVKDIEMFSLCEHHLVP 119

  Fly   221 FYGKVSIGYLPCNKILGLSKLARIVEIFSRRLQVQERLTKQIAVAVTQAVQPAGVAVVVEGVHMC 285
            |.|||.|||:|..|:|||||||||||:||||||||||||||||.|:.|||||:|||||:|..|||
 Worm   120 FMGKVHIGYIPNKKVLGLSKLARIVEMFSRRLQVQERLTKQIATAMVQAVQPSGVAVVIEASHMC 184

  Fly   286 MVMRGVQKINSKTVTSTMLGVFRDDPKTREEFLNLVNSK 324
            ||||||||||:.|.||.||||||||||||||||||:|.:
 Worm   185 MVMRGVQKINASTTTSCMLGVFRDDPKTREEFLNLINKR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuNP_726038.1 GTP_cyclohydro1 141..323 CDD:238349 136/181 (75%)
cat-4NP_505710.1 GTP_cyclohydro1 38..222 CDD:238349 138/191 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159654
Domainoid 1 1.000 276 1.000 Domainoid score I927
eggNOG 1 0.900 - - E1_COG0302
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H132
Inparanoid 1 1.050 283 1.000 Inparanoid score I1738
Isobase 1 0.950 - 0 Normalized mean entropy S627
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D529046at33208
OrthoFinder 1 1.000 - - FOG0002669
OrthoInspector 1 1.000 - - oto17230
orthoMCL 1 0.900 - - OOG6_101153
Panther 1 1.100 - - LDO PTHR11109
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R477
SonicParanoid 1 1.000 - - X2044
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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