DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pu and gch1

DIOPT Version :10

Sequence 1:NP_726038.1 Gene:Pu / 37415 FlyBaseID:FBgn0003162 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001129727.2 Gene:gch1 / 100192219 ZFINID:ZDB-GENE-070720-5 Length:251 Species:Danio rerio


Alignment Length:186 Identity:139/186 - (74%)
Similarity:162/186 - (87%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 EALLPDMARSYRLLLGGLGENPDRQGLIKTPERAAKAMLYFTKGYDQSLEDVLNGAVFDEDHDEM 202
            |..||.:|.:|..:|.||||:|.||||:|||.|||.||.:|||||.:.:.||||.|:||||||||
Zfish    66 EMSLPSIAAAYTTILRGLGEDPQRQGLLKTPWRAATAMQFFTKGYQEKIIDVLNDAIFDEDHDEM 130

  Fly   203 VVVKDIEMFSMCEHHLVPFYGKVSIGYLPCNKILGLSKLARIVEIFSRRLQVQERLTKQIAVAVT 267
            |:||||:|||||||||||.:|:|.|||||..::||||||||||||:|||||||||||||||||:|
Zfish   131 VIVKDIDMFSMCEHHLVPIFGRVHIGYLPNKRVLGLSKLARIVEIYSRRLQVQERLTKQIAVAIT 195

  Fly   268 QAVQPAGVAVVVEGVHMCMVMRGVQKINSKTVTSTMLGVFRDDPKTREEFLNLVNS 323
            :|:|||||.||||..|||||||||||:||||||||||||||:|||||:|||.|:.|
Zfish   196 EALQPAGVGVVVEATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTRDEFLTLIRS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuNP_726038.1 GTP_cyclohydro1 141..323 CDD:238349 137/181 (76%)
gch1NP_001129727.2 GTP_cyclohydro1 67..251 CDD:238349 137/183 (75%)

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