Protein Alignment Xpd and AT1G20750

DIOPT Version :10

• Sequence 1: NP_726036.2
• Gene: Xpd / 37414
• FlyBaseID: FBgn0261850
• Length: 769
• Species: Drosophila melanogaster
• Sequence 2: NP_173498.3
• Gene: AT1G20750 / 838665
• AraportID: AT1G20750
• Length: 1144
• Species: Arabidopsis thaliana
• Alignment Length: 777
• Identity: 183/777 - (23%)
• Similarity: 289/777 - (37%)
• Gaps: 229/777 - (29%)

  Fly     5 VDGLLVYFPYEYIYPEQYAYMLELKRSL-----DAKGHCLLEMPSGTGKTATLLSLIVAYM---- 60
            :.||.|.|||: .|..|.|:|..:..:|     |...|.|||.|:||||:.:||..::|:.
plant    29 IGGLQVEFPYQ-PYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92

  Fly    61 -----------------------VE-HPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNP 101
                                   || |...:..:.|.|||..:|.:||.|.        |.....
plant    93 SRFPNGNLSHSKTQPSDIAGSSNVEPHEPQIPTIYYASRTHAQITQVIREY--------RKTGYR 149

  Fly   102 PPFTGLVLSSRKNMCIHPEVSKEREGKA-VDGKCYGLTASYIRERHEMDTETPICQYFEG----F 161
            .|.|  ||.|||..|.:..|    :||. ||.||..|.         .|.:...|..|.|    .
plant   150 VPMT--VLGSRKRYCTNSHV----QGKENVDEKCRLLL---------KDKKNIKCAEFNGVGRIL 199

  Fly   162 SLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMS 226
            :....:.|...||:.|:||                                  .||.:.|:..:.
plant   200 AYPSLQQTGHNGVHDIEDL----------------------------------VKIGKTVTGRLL 230

  Fly   227 RESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQG 291
            :.    |....|::::..::.|:.:....:.:..|.|..::::..:|        .:....:|:|
plant   231 KS----FTVHSNMEDIAREAGSINLEEDIIFKLKNELEQMSEVEPEI--------YDSLYEVVEG 283

  Fly   292 L-------KDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHV 349
            |       ||:..:||.|...:|                ...|..|..|:.|           ::
plant   284 LISWIGRKKDSLAKRDVDHYFSN----------------WTGDRALKELKEF-----------NI 321

  Fly   350 VQES----PAGFLKDISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHF----ATL 406
            .:|:    .|.|.:.|:.....|..|.:       ..|..:.:|.|.|..|  .:|:|    .:.
plant   322 TRENFPNLKACFNQAITKSEAAEIDPDK-------PYLSGISVSTLEELFA--TLTYFFSRNGSH 377

  Fly   407 VSTYTKGFTIIIEPFDDK-TPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY--- 467
            |..|..|.....:..|:. |.|.|     ..|::.|:....:.....::::||||||||:.:
plant   378 VLDYEMGLQRSAKRGDNGWTNTFS-----LWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSE 437

  Fly   468 -----------PKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYG 521
                       |.::|.:..|.:....|:           .||  ..:::.:.|.|..|.....|
plant   438 LGMQFGTCLEAPHVIDPNMQVWAGAISTV-----------PGN--YPLNASYRTAEAYAFQDALG 489

  Fly   522 QLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRYKLLFIE----TQDNAETSYALM 582
            :.|.|:...||.|.:.||.||..:|.:...|::.|....|.....||||    ::|:.||  .|.
plant   490 KSLEEICTIVPGGSLVFFPSYKLMEKLCTRWHETGQWSRLCLKTDLFIEPRGGSKDDFET--VLK 552

  Fly   583 NY----------------VKAC---------DCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFG 622
            .|                ||..         |..||:..|||.|||||||:||.....|||::.|
plant   553 EYYDSISGKNRLIGRNSSVKKAGSVITEAQDDSKRGSAFLAVCRGKVSEGMDFSDDNARAVIIVG 617

  Fly   623 IPYVYTQSRILKARLDYLRDQFQIREN-----DFLTFDAMRHAAQCVGRALRGKTDYGIMIF 679
            ||.......:::.:..| .|..:..:|     ::....|.|...|..||.:|.:.|||.:||
plant   618 IPLPNLGDILVELKRKY-NDTNKSSKNLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIF 678

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Xpd	NP_726036.2	rad3	7..717	CDD:273169	183/775 (24%)
AT1G20750	NP_173498.3	rad3	31..679	CDD:273169	183/775 (24%)