Sequence 1: | NP_726036.2 | Gene: | Xpd / 37414 | FlyBaseID: | FBgn0261850 | Length: | 769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006247125.1 | Gene: | Brip1 / 360588 | RGDID: | 1307659 | Length: | 1166 | Species: | Rattus norvegicus |
Alignment Length: | 997 | Identity: | 214/997 - (21%) |
---|---|---|---|
Similarity: | 365/997 - (36%) | Gaps: | 312/997 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 SVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY--------- 59
Fly 60 ---MVEHPETVRKLIYCS--------------------------------------RTVPE---- 79
Fly 80 -------------------IEKV-IAELQNLMVYYERHC-------------------PNPP--- 102
Fly 103 ----------------------------------------------------------------P 103
Fly 104 FTGL---VLSSRKNMCIHPEV-----SKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEG 160
Fly 161 FSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEM 225
Fly 226 SRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQ 290
Fly 291 GLKDAS---VQRD----------TDMIL----------ANPVLPNDVLTEVVPGNIRNADHFLSF 332
Fly 333 LRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIE----------RKPLRFCAERLSSLLRTLE 387
Fly 388 ISDLTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKT--PTVSNP----------ILHFSCLDS 440
Fly 441 SIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTIS 505
Fly 506 SKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRYKLLFIE 570
Fly 571 TQDNAETSY--ALMNYVKACDC-GR--GAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQS 630
Fly 631 RILKARLDYLRDQFQIR----ENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKR- 690
Fly 691 -SRLPKWIQEHLV--DSFCNLSTEEAVQLARRWLR-----RMAQPFTREDQLGISLLTLAQLE-- 745
Fly 746 ----------NMEQEKLERQAQ 757 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Xpd | NP_726036.2 | rad3 | 7..717 | CDD:273169 | 203/935 (22%) |
DEXDc2 | 8..280 | CDD:214693 | 87/439 (20%) | ||
HBB | 270..413 | CDD:284245 | 25/175 (14%) | ||
HELICc2 | 542..686 | CDD:214694 | 49/152 (32%) | ||
Brip1 | XP_006247125.1 | rad3 | 242..878 | CDD:273169 | 165/697 (24%) |
DEAD_2 | 245..412 | CDD:284209 | 46/179 (26%) | ||
Helicase_C_2 | 677..863 | CDD:290046 | 63/185 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |