Sequence 1: | NP_726036.2 | Gene: | Xpd / 37414 | FlyBaseID: | FBgn0261850 | Length: | 769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038940692.1 | Gene: | Ddx11 / 316767 | RGDID: | 1306675 | Length: | 906 | Species: | Rattus norvegicus |
Alignment Length: | 701 | Identity: | 168/701 - (23%) |
---|---|---|---|
Similarity: | 299/701 - (42%) | Gaps: | 106/701 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 65 ETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPF---TGLV-LSSRKNMCIHPEVSKER 125
Fly 126 EGKAVDGKCYGLTASYIRERHE---MDTETP---------ICQYFEGFSLEGKESTLPVGVYSID 178
Fly 179 DLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVC 243
Fly 244 IDSMSVKIN-RRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRDTDMILAN 307
Fly 308 P---VLP---------NDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGF--- 357
Fly 358 ----LKDISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTL--------ITHFATLVSTY 410
Fly 411 TKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPM-DMYPKIL--- 471
Fly 472 --DFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDG 534
Fly 535 IVCFFTSYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNY---VKACDCGR---- 592
Fly 593 GAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIREND------- 650
Fly 651 FLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Xpd | NP_726036.2 | rad3 | 7..717 | CDD:273169 | 168/701 (24%) |
DEXDc2 | 8..280 | CDD:214693 | 50/231 (22%) | ||
HBB | 270..413 | CDD:284245 | 33/169 (20%) | ||
HELICc2 | 542..686 | CDD:214694 | 48/157 (31%) | ||
Ddx11 | XP_038940692.1 | Csf4_U | 23..>113 | CDD:357161 | |
rad3 | 225..889 | CDD:273169 | 167/698 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |