Sequence 1: | NP_726036.2 | Gene: | Xpd / 37414 | FlyBaseID: | FBgn0261850 | Length: | 769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001348650.1 | Gene: | xpd-1 / 175190 | WormBaseID: | WBGene00021752 | Length: | 755 | Species: | Caenorhabditis elegans |
Alignment Length: | 755 | Identity: | 440/755 - (58%) |
---|---|---|---|
Similarity: | 577/755 - (76%) | Gaps: | 7/755 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPE 65
Fly 66 TVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAV 130
Fly 131 DGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLA 195
Fly 196 RYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERST 260
Fly 261 NALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRN 325
Fly 326 ADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIERKPLRFCAERLSSLLRTLEISD 390
Fly 391 LTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVV 455
Fly 456 ITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNY 520
Fly 521 GQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYV 585
Fly 586 KACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIREND 650
Fly 651 FLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQ 715
Fly 716 LARRWLRRMAQPFTREDQLGISLLTLAQLENME-QEKLER 754 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Xpd | NP_726036.2 | rad3 | 7..717 | CDD:273169 | 418/709 (59%) |
DEXDc2 | 8..280 | CDD:214693 | 138/271 (51%) | ||
HBB | 270..413 | CDD:284245 | 78/142 (55%) | ||
HELICc2 | 542..686 | CDD:214694 | 104/143 (73%) | ||
xpd-1 | NP_001348650.1 | rad3 | 7..702 | CDD:273169 | 412/700 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165691 | |
Domainoid | 1 | 1.000 | 274 | 1.000 | Domainoid score | I940 |
eggNOG | 1 | 0.900 | - | - | E1_COG1199 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H344 | |
Inparanoid | 1 | 1.050 | 908 | 1.000 | Inparanoid score | I186 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S304 |
OMA | 1 | 1.010 | - | - | QHG62382 | |
OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005257 | |
OrthoInspector | 1 | 1.000 | - | - | oto18694 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101742 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11472 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1054 |
SonicParanoid | 1 | 1.000 | - | - | X3778 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
18 | 17.750 |