| Sequence 1: | NP_726036.2 | Gene: | Xpd / 37414 | FlyBaseID: | FBgn0261850 | Length: | 769 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_031750114.1 | Gene: | rtel1 / 100487920 | XenbaseID: | XB-GENE-6035930 | Length: | 1269 | Species: | Xenopus tropicalis |
| Alignment Length: | 825 | Identity: | 208/825 - (25%) |
|---|---|---|---|
| Similarity: | 358/825 - (43%) | Gaps: | 157/825 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 KLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEH--- 63
Fly 64 ----------------PE--------------------TVRKLIYCSRTVPEIEKVIAELQNLMV 92
Fly 93 YYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQY 157
Fly 158 FEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVS 222
Fly 223 KEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQR 287
Fly 288 MVQG------LKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRV 346
Fly 347 HHVVQESPAGFLKDI---------SSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITH 402
Fly 403 FATLVSTYTKGFTIIIEPFDD--KTP---TVSN------PILHFSCLDSSIAMAPVFSR-FQTVV 455
Fly 456 ITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPM--------------IVSKGNDQVTISS 506
Fly 507 KFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRYKLLFIET 571
Fly 572 QDNAETSYALMNY---VKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRIL 633
Fly 634 KARLDYL----RDQ----FQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKR 690
Fly 691 SRLPKWIQEHL--VDSFCNLSTEEAVQLARRWLRRMAQPFTREDQ 733 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Xpd | NP_726036.2 | rad3 | 7..717 | CDD:273169 | 201/802 (25%) |
| DEXDc2 | 8..280 | CDD:214693 | 86/310 (28%) | ||
| HBB | 270..413 | CDD:284245 | 26/157 (17%) | ||
| HELICc2 | 542..686 | CDD:214694 | 42/154 (27%) | ||
| rtel1 | XP_031750114.1 | rad3 | 8..741 | CDD:273169 | 200/796 (25%) |
| HN_RTEL1 | 881..981 | CDD:259826 | |||
| HN_RTEL1 | 1028..1128 | CDD:259826 | |||
| RING_Ubox | 1208..1247 | CDD:418438 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D141017at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||