Protein Alignment LSm1 and LSM1A

DIOPT Version :9

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_564072.1
• Gene: LSM1A / 838495
• AraportID: AT1G19120
• Length: 128
• Species: Arabidopsis thaliana
• Alignment Length: 94
• Identity: 56/94 - (59%)
• Similarity: 71/94 - (75%)
• Gaps: 3/94 - (3%)

  Fly    17 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
            :||||:|||||||.|:|.|||.|||||.||:...||:.||:.|.|||.|::|||||||||:||:|
plant    19 LDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGELD 83

  Fly    82 REKEQKLPLKEISVD--EILDAQRREQEQ 108
            .|||: ||...:.|.  ||..||:.|:|:
plant    84 VEKEE-LPAHMVQVPEAEIKRAQKAEKEE 111

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	42/62 (68%)
LSM1A	NP_564072.1	LSm1	9..82	CDD:212475	42/62 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	86	1.000	Domainoid score	I2787
eggNOG	1	0.900	-	-		E1_KOG1782
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	102	1.000	Inparanoid score	I2157
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1508864at2759
OrthoFinder	1	1.000	-	-		FOG0004320
OrthoInspector	1	1.000	-	-		otm3472
orthoMCL	1	0.900	-	-		OOG6_102846
Panther	1	1.100	-	-	O	PTHR15588
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3053
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.830