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Protein Alignment LSm1 and SNRNP-G
DIOPT Version :10
| Sequence 1: | NP_611559.1 |
Gene: | LSm1 / 37413 |
FlyBaseID: | FBgn0261067 |
Length: | 137 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_179971.1 |
Gene: | SNRNP-G / 816925 |
AraportID: | AT2G23930 |
Length: | 80 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 69 |
Identity: | 27/69 - (39%) |
| Similarity: | 43/69 - (62%) |
Gaps: | 4/69 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLL 77
|.:.:||||.:.|...|.:.|.||..|||.|||:..|:| :: ||:..|| |:.:|||.::|.:
plant 10 LKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE-VN-GNDKTDI--GMVVIRGNSIVTV 70
Fly 78 GEID 81
..::
plant 71 EALE 74
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm1 | NP_611559.1 |
LSm1 |
7..80 |
CDD:212475 |
27/66 (41%) |
| SNRNP-G | NP_179971.1 |
Sm_G |
6..74 |
CDD:212466 |
27/67 (40%) |
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