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Protein Alignment LSm1 and lsm8
DIOPT Version :10
| Sequence 1: | NP_611559.1 |
Gene: | LSm1 / 37413 |
FlyBaseID: | FBgn0261067 |
Length: | 137 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001289395.1 |
Gene: | lsm8 / 566017 |
ZFINID: | ZDB-GENE-070629-3 |
Length: | 96 |
Species: | Danio rerio |
| Alignment Length: | 83 |
Identity: | 26/83 - (31%) |
| Similarity: | 49/83 - (59%) |
Gaps: | 1/83 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 17 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNE-YGDIPRGVFIIRGENVVLLGEI 80
:.:.:.::..|||.::|.|:..||..||:|..:.||:...:: ...:..|::|:||:||.::|||
Zfish 9 IHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEI 73
Fly 81 DREKEQKLPLKEISVDEI 98
|.|.:..|.|..|..:.:
Zfish 74 DEETDSALDLGNIRAEPL 91
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm1 | NP_611559.1 |
LSm1 |
7..80 |
CDD:212475 |
19/63 (30%) |
| lsm8 | NP_001289395.1 |
LSm8 |
2..92 |
CDD:212474 |
26/83 (31%) |
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