Protein Alignment LSm1 and lsm1

DIOPT Version :9

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_001011191.1
• Gene: lsm1 / 496613
• XenbaseID: XB-GENE-971223
• Length: 133
• Species: Xenopus tropicalis
• Alignment Length: 132
• Identity: 83/132 - (62%)
• Similarity: 110/132 - (83%)
• Gaps: 1/132 - (0%)

  Fly     4 LNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFI 68
            :|.:.|||.|:|::|||.:|||||||||||||||:||||||||.:|:||||||.:|||||||:|:
 Frog     1 MNYMPGTASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFV 65

  Fly    69 IRGENVVLLGEIDREKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVD-ANII 132
            :||||||||||||.|||...||.::|::|||:.||.||:.:.|..:|..:|||||||::. |:.:
 Frog    66 VRGENVVLLGEIDLEKESDTPLLQVSIEEILEDQRVEQQSKNEAEKLKVQALKERGLSIPRADTL 130

  Fly   133 NE 134
            :|
 Frog   131 DE 132

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	55/72 (76%)
lsm1	NP_001011191.1	LSm1	4..77	CDD:212475	55/72 (76%)
		Rotamase_2	<64..131	CDD:330945	36/66 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	113	1.000	Domainoid score	I6089
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H40945
Inparanoid	1	1.050	172	1.000	Inparanoid score	I3978
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1508864at2759
OrthoFinder	1	1.000	-	-		FOG0004320
OrthoInspector	1	1.000	-	-		oto103931
Panther	1	1.100	-	-	LDO	PTHR15588
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R665
SonicParanoid	1	1.000	-	-		X3053
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.100