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Protein Alignment LSm1 and snrpg
DIOPT Version :10
| Sequence 1: | NP_611559.1 |
Gene: | LSm1 / 37413 |
FlyBaseID: | FBgn0261067 |
Length: | 137 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001004660.2 |
Gene: | snrpg / 447922 |
ZFINID: | ZDB-GENE-040912-105 |
Length: | 76 |
Species: | Danio rerio |
| Alignment Length: | 75 |
Identity: | 29/75 - (38%) |
| Similarity: | 44/75 - (58%) |
Gaps: | 6/75 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 AH---LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
|| |.:.:||||.:.|..||.:.|.||..|.|.|||:..||| :..|.:...| |:.:|||.
Zfish 4 AHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIE-MAPGGQMNTI--GMVVIRGN 65
Fly 73 NVVLLGEIDR 82
::::|..::|
Zfish 66 SIIMLEALER 75
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm1 | NP_611559.1 |
LSm1 |
7..80 |
CDD:212475 |
28/71 (39%) |
| snrpg | NP_001004660.2 |
Sm_G |
5..74 |
CDD:212466 |
27/71 (38%) |
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