DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm1 and CG9344

DIOPT Version :10

Sequence 1:NP_611559.1 Gene:LSm1 / 37413 FlyBaseID:FBgn0261067 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_611528.1 Gene:CG9344 / 37372 FlyBaseID:FBgn0034564 Length:79 Species:Drosophila melanogaster


Alignment Length:61 Identity:19/61 - (31%)
Similarity:33/61 - (54%) Gaps:7/61 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIH--VGNEYGDIPRGVFIIRGENVVLL 77
            :.:.|.|.:|....|.|..:|.:.|:.|::|.|.::  :.|:|||.     .|||.||:.:
  Fly    17 RPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYGDA-----FIRGNNVLYI 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm1NP_611559.1 LSm1 7..80 CDD:212475 19/61 (31%)
CG9344NP_611528.1 LSm6 8..73 CDD:212473 19/61 (31%)

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