Protein Alignment LSm1 and Lsm1

DIOPT Version :9

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_001102346.1
• Gene: Lsm1 / 364624
• RGDID: 1304967
• Length: 133
• Species: Rattus norvegicus
• Alignment Length: 132
• Identity: 82/132 - (62%)
• Similarity: 111/132 - (84%)
• Gaps: 1/132 - (0%)

  Fly     4 LNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFI 68
            :|.:.|||.|:|::|||.:|||||||||||:|||:||||||||.:|:||||||.:|||||||:|:
  Rat     1 MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIPRGIFV 65

  Fly    69 IRGENVVLLGEIDREKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVD-ANII 132
            :||||||||||||.|||...||:::|::|||:.||.||:.|.|..:|..:|||:|||::. |:.:
  Rat    66 VRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQSRLEAEKLKVQALKDRGLSIPRADTL 130

  Fly   133 NE 134
            :|
  Rat   131 DE 132

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	54/72 (75%)
Lsm1	NP_001102346.1	LSm1	4..77	CDD:212475	54/72 (75%)
		PRK10788	<64..131	CDD:182731	36/66 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166341707
Domainoid	1	1.000	112	1.000	Domainoid score	I6076
eggNOG	1	0.900	-	-		E1_KOG1782
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H40945
Inparanoid	1	1.050	171	1.000	Inparanoid score	I4027
OMA	1	1.010	-	-		QHG55192
OrthoDB	1	1.010	-	-		D1508864at2759
OrthoFinder	1	1.000	-	-		FOG0004320
OrthoInspector	1	1.000	-	-		oto97248
orthoMCL	1	0.900	-	-		OOG6_102846
Panther	1	1.100	-	-	LDO	PTHR15588
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3053
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770