Protein Alignment LSm1 and SmF

DIOPT Version :10

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_523708.2
• Gene: SmF / 36314
• FlyBaseID: FBgn0000426
• Length: 88
• Species: Drosophila melanogaster
• Alignment Length: 83
• Identity: 25/83 - (30%)
• Similarity: 43/83 - (51%)
• Gaps: 12/83 - (14%)

  Fly     4 LNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFI 68
            ||.|.|         |.::|.|:.|:...|:|.|||.:.|:.|..| |.:..|:..|::  |..:
  Fly    13 LNGLTG---------KPVLVKLKWGQEYKGFLVSVDGYMNMQLANT-EEVIEGSVTGNL--GEVL 65

  Fly    69 IRGENVVLLGEIDREKEQ 86
            ||..||:.:..::.:.|:
  Fly    66 IRCNNVLYIKGMEDDDEE 83

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	22/72 (31%)
SmF	NP_523708.2	Sm_F	8..76	CDD:212469	24/74 (32%)