Protein Alignment LSm1 and Lsm3

DIOPT Version :9

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_001100081.1
• Gene: Lsm3 / 297455
• RGDID: 1305971
• Length: 102
• Species: Rattus norvegicus
• Alignment Length: 86
• Identity: 24/86 - (27%)
• Similarity: 44/86 - (51%)
• Gaps: 18/86 - (20%)

  Fly    10 TAHLLEE--------VDKKLMVLLRDGRTLIGYLRSVDQFANLVL---QRTIERIHVGNE-YGDI 62
            |.:.:||        :|:::.|.:|:.|.|.|.|.:.||..|::|   :.|:..|.:..| |.:|
  Rat    10 TTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74

  Fly    63 PRG------VFIIRGENVVLL 77
            .:.      :..:||:.|||:
  Rat    75 YKSTKRNIPMLFVRGDGVVLV 95

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	24/86 (28%)
Lsm3	NP_001100081.1	LSm3	16..97	CDD:212477	22/80 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910