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Protein Alignment LSm1 and Lsm8
DIOPT Version :10
| Sequence 1: | NP_611559.1 |
Gene: | LSm1 / 37413 |
FlyBaseID: | FBgn0261067 |
Length: | 137 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001100055.1 |
Gene: | Lsm8 / 296913 |
RGDID: | 1308442 |
Length: | 96 |
Species: | Rattus norvegicus |
| Alignment Length: | 90 |
Identity: | 29/90 - (32%) |
| Similarity: | 53/90 - (58%) |
Gaps: | 1/90 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNE-YGDIPRGVFIIRGEN 73
|:.|...:::.:.|:..|||.::|.|:..||..||:|..:.||:...:: ...:..|::|:||:|
Rat 2 TSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDN 66
Fly 74 VVLLGEIDREKEQKLPLKEISVDEI 98
|.::||||.|.:..|.|..|..:.:
Rat 67 VAVIGEIDEETDSALDLGNIRAEPL 91
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm1 | NP_611559.1 |
LSm1 |
7..80 |
CDD:212475 |
22/70 (31%) |
| Lsm8 | NP_001100055.1 |
LSm8 |
3..92 |
CDD:212474 |
28/89 (31%) |
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