Protein Alignment LSm1 and lsm1

DIOPT Version :9

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_595520.1
• Gene: lsm1 / 2540520
• PomBaseID: SPBC3D6.08c
• Length: 140
• Species: Schizosaccharomyces pombe
• Alignment Length: 125
• Identity: 60/125 - (48%)
• Similarity: 86/125 - (68%)
• Gaps: 2/125 - (1%)

  Fly     6 PLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIR 70
            |...:..|::.||:|::|:||||:.|||.|||.||||||:||.|||||:|.:.||||.|||:|:|
pombe     9 PFTTSGSLVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVR 73

  Fly    71 GENVVLLGEIDREKEQKL--PLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVD 128
            |||||||||:|.:||...  .|:.:..:|:....:..:|::::..|...|.|...|.:||
pombe    74 GENVVLLGELDLDKEYDAVKQLRRMPAEELYPLAKLHEEEKKKNIREKGKYLHSVGFSVD 133

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	46/72 (64%)
lsm1	NP_595520.1	LSm1	10..83	CDD:212475	46/72 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	92	1.000	Domainoid score	I2012
eggNOG	1	0.900	-	-		E1_KOG1782
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H40945
Inparanoid	1	1.050	114	1.000	Inparanoid score	I1544
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004320
OrthoInspector	1	1.000	-	-		oto101330
orthoMCL	1	0.900	-	-		OOG6_102846
Panther	1	1.100	-	-	LDO	PTHR15588
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R665
SonicParanoid	1	1.000	-	-		X3053
TreeFam	1	0.960	-	-
	13	12.850