Protein Alignment LSm1 and lsm-1

DIOPT Version :9

• Sequence 1: NP_611559.1
• Gene: LSm1 / 37413
• FlyBaseID: FBgn0261067
• Length: 137
• Species: Drosophila melanogaster
• Sequence 2: NP_496385.1
• Gene: lsm-1 / 174700
• WormBaseID: WBGene00003076
• Length: 125
• Species: Caenorhabditis elegans
• Alignment Length: 128
• Identity: 54/128 - (42%)
• Similarity: 75/128 - (58%)
• Gaps: 20/128 - (15%)

  Fly     1 MDDLNP-LAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPR 64
            ||..:| |.|...|.|::||||:|:|||||.|||:|||:||||||:|:..:||..|...:.:..:
 Worm     1 MDLPDPYLPGAISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQ 65

  Fly    65 GVFIIRGENVVLLGEIDREKEQKLPLKEISVDEILDAQRREQE--------------QRQEKH 113
            |..:||||||.|.||||...|  ..|.::|.:|.   :|.|.|              ::.|:|
 Worm    66 GFMLIRGENVELAGEIDDTIE--TGLTQVSPEEF---RRLEDEYIAKNPPKFLKRQAEKTEEH 123

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm1	NP_611559.1	LSm1	7..80	CDD:212475	39/72 (54%)
lsm-1	NP_496385.1	LSm1	8..81	CDD:212475	39/72 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159806
Domainoid	1	1.000	74	1.000	Domainoid score	I5984
eggNOG	1	0.900	-	-		E1_KOG1782
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H40945
Inparanoid	1	1.050	86	1.000	Inparanoid score	I3734
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55192
OrthoDB	1	1.010	-	-		D1508864at2759
OrthoFinder	1	1.000	-	-		FOG0004320
OrthoInspector	1	1.000	-	-		oto18510
orthoMCL	1	0.900	-	-		OOG6_102846
Panther	1	1.100	-	-	LDO	PTHR15588
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R665
SonicParanoid	1	1.000	-	-		X3053
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	16	15.800