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Protein Alignment LSm1 and snr-7
DIOPT Version :10
| Sequence 1: | NP_611559.1 |
Gene: | LSm1 / 37413 |
FlyBaseID: | FBgn0261067 |
Length: | 137 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_491032.1 |
Gene: | snr-7 / 171834 |
WormBaseID: | WBGene00004920 |
Length: | 77 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 70 |
Identity: | 22/70 - (31%) |
| Similarity: | 38/70 - (54%) |
Gaps: | 3/70 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLL 77
|.:.:||::.:.|...|.:.|.||..|.|.|:|:...:|....| |.:..|:.:|||.:||::
Worm 9 LKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDG---GSVNLGMTVIRGNSVVIM 70
Fly 78 GEIDR 82
...:|
Worm 71 EPKER 75
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm1 | NP_611559.1 |
LSm1 |
7..80 |
CDD:212475 |
21/66 (32%) |
| snr-7 | NP_491032.1 |
Sm_G |
5..74 |
CDD:212466 |
21/67 (31%) |
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