DRSC/TRiP Functional Genomics Resources

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Protein Alignment hng1 and madf-4

DIOPT Version :10

Sequence 1:NP_611558.2 Gene:hng1 / 37412 FlyBaseID:FBgn0034599 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:344 Identity:82/344 - (23%)
Similarity:136/344 - (39%) Gaps:83/344 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSNHRPL-DDSDILLIQTIRETPSLYDPQLPSFRLSQRKEEDWAKVADLLNISIS------DARR 59
            |.||.|| ||..:.||.:::..|.:|:...|..:::..|.|.|    .|::|.|.      :..|
 Worm     8 SPNHDPLEDDFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIW----KLISIEIGYDGQPVELER 68

  Fly    60 RWTCLRDRYSRELKQ-KRLHPSGEFGH-NDFFRKMDFLRDFVRKRRERRGRERDREQKPTGWMKV 122
            :|..:||:|.|..|| |:..|..:... .:::.||.||..:|    |.|.|:|.::.        
 Worm    69 KWKHMRDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYV----EHRNRKRQKDY-------- 121

  Fly   123 DLQRRRRTRLPIDT---------ETLIEEQGSHAYDEGEEQHDYDAKLESHTTQSETY------- 171
             |.......|..||         |.|..|....:.|.|     |::   .|||.|.:.       
 Worm   122 -LNSNTPDFLDDDTAFLDGLSVKEMLKPESLLTSNDAG-----YNS---PHTTSSSSSSGSNNNG 177

  Fly   172 ----SVVVEADDGQEPEQESFDEFLGD-AECEQKVKVVTIHPE-----------------IAAPN 214
                |..::.:|.::.....:|:|:.: .|.|:..:....|.:                 ..||:
 Worm   178 RFLDSPTIDIEDDKKNLALIYDKFVANQTENEKNHRFSNKHGKDLLFSTTNTLIEKLATTSTAPS 242

  Fly   215 ATSAPEPIESNHADLNYLVCMPPNANQEREHSAPELPNPTAVITQKTCETEDDFFCKSIAAYLRQ 279
            ::...:||     .:..|...||  .||:......|.:    |..:..|.:...|.:|||..|..
 Worm   243 SSRKRKPI-----PVQILPSSPP--PQEKNTKIELLED----ILNEPNEDQVSLFVRSIARTLND 296

  Fly   280 LSRVHKIKAKVEMYQILEK 298
            |.|.....|:||:.::|.|
 Worm   297 LDREKFAMARVEISKVLYK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hng1NP_611558.2 MADF 15..98 CDD:214738 25/90 (28%)
BESS 264..298 CDD:460758 11/33 (33%)
madf-4NP_505565.3 MADF 22..111 CDD:214738 26/96 (27%)

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