Sequence 1: | NP_001097394.1 | Gene: | CG4266 / 37411 | FlyBaseID: | FBgn0034598 | Length: | 1306 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
Alignment Length: | 746 | Identity: | 151/746 - (20%) |
---|---|---|---|
Similarity: | 225/746 - (30%) | Gaps: | 263/746 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 377 SEQQTIEVINLDGGDSRSPTPDRDRYKRSRRNSRSRTRSPRGRGAGGGTG--NDRRRRGTRSRSR 439
Fly 440 SRSPRSSRRRGSRDRDRMDRSNRDKERDREHERERRKKGLPDIKKEHLSVCSTTLWV----GHLS 500
Fly 501 KLVYQEELSDTFGEYGDI-VSIDQIVPRGCAFIVMNRRQDAHKAMQALKNHKLQGRAITISWAAG 564
Fly 565 KGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGGMFDEDTMPIQMKQKINQAKNAAKEHK 629
Fly 630 GASIAEAAGAPSVGVPPPNLIFGIDTTQPPPVGPVGPVGPPPGPGAPPPGLMGMVRGQFPMAPPM 694
Fly 695 GINMPPPIMMPPTNMPPPMMMPTTNMPPPMMMPPTMMPPGFPGIGGPPH---------------P 744
Fly 745 MALPPGAPFPPPGA------------VPPPIPSGGQISNSGN----VSDDQM----------DIE 783
Fly 784 MDLEDAPP-----------------------LPPQQQANFNPSPSNVDLSPAAM-------ANEM 818
Fly 819 FQQRDRERDRDNRDRSRGPGNSRWGG---------------RDDVVEAAERWRAE-NGGGGGGPG 867
Fly 868 ----------SGLGPNAAFNEARARLNLNPIEHGMPRPD-----FMDFDNRGG--PGGPRGMGPR 915
Fly 916 GNHNGGGPGGDFFPPNMNHNRFNQPTSL--MQMRIPPPASFNQRMGGPAGNGGNGVGPMFMRNQG 978
Fly 979 GGPGGAGPSGGGPGGAGTGGGGPGGRQQGPG 1009 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4266 | NP_001097394.1 | CID | 7..125 | CDD:239621 | |
RRM | <488..>593 | CDD:223796 | 21/109 (19%) | ||
RRM_SCAF4_SCAF8 | 490..566 | CDD:240673 | 17/80 (21%) | ||
DUF2413 | 1147..>1254 | CDD:287302 | |||
Herpes_DNAp_acc | <1206..1304 | CDD:282746 | |||
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | 46/242 (19%) |
RRM1_Spen | 98..175 | CDD:240754 | 17/106 (16%) | ||
RRM2_Spen | 312..390 | CDD:240755 | 11/78 (14%) | ||
RRM3_Spen | 397..467 | CDD:240756 | 16/82 (20%) | ||
SPOC | 630..789 | CDD:311609 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR23189 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |