Sequence 1: | NP_001097394.1 | Gene: | CG4266 / 37411 | FlyBaseID: | FBgn0034598 | Length: | 1306 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038938548.1 | Gene: | Rbm15b / 315988 | RGDID: | 1305937 | Length: | 887 | Species: | Rattus norvegicus |
Alignment Length: | 366 | Identity: | 74/366 - (20%) |
---|---|---|---|
Similarity: | 105/366 - (28%) | Gaps: | 148/366 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 955 NQRMGGPAGNGGNGVGPMFMRN----QGGGPGGAGPSGGG------------PGGAGTGGGGPGG 1003
Fly 1004 RQQGPGFFNPRNPFNDNQRGRGGQSGGGVRGVGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGG 1068
Fly 1069 PGGNRFRGERGGEMMDDRRGNNSRGGRGGPREDRERPGFGNRRGSRDDSNRHSISSTDEGNKAAS 1133
Fly 1134 ETEPKPKNVETE-LGSTNTGAPAAATRVDTEEDWDQELQDYEARM--EAQKPGERASQSANSP-- 1193
Fly 1194 ----------PQEKLPAENENFAK------------PADVTGDPLVAKSQTETSAACTPLYDELP 1236
Fly 1237 PPAVPQTPTQP----------PKEPQGSPPRPAPPVIETEA 1267 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4266 | NP_001097394.1 | CID | 7..125 | CDD:239621 | |
RRM | <488..>593 | CDD:223796 | |||
RRM_SCAF4_SCAF8 | 490..566 | CDD:240673 | |||
DUF2413 | 1147..>1254 | CDD:287302 | 27/142 (19%) | ||
Herpes_DNAp_acc | <1206..1304 | CDD:282746 | 20/84 (24%) | ||
Rbm15b | XP_038938548.1 | RRM1_RBM15B | 134..215 | CDD:409970 | 11/80 (14%) |
RRM2_RBM15B | 325..409 | CDD:409972 | |||
RRM3_RBM15B | 412..487 | CDD:409974 | |||
SF-CC1 | 568..>704 | CDD:273721 | |||
SPOC | 711..884 | CDD:400205 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23189 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |