Sequence 1: | NP_001097394.1 | Gene: | CG4266 / 37411 | FlyBaseID: | FBgn0034598 | Length: | 1306 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006227920.3 | Gene: | Scaf8 / 245926 | RGDID: | 708362 | Length: | 1351 | Species: | Rattus norvegicus |
Alignment Length: | 1454 | Identity: | 431/1454 - (29%) |
---|---|---|---|
Similarity: | 592/1454 - (40%) | Gaps: | 419/1454 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKVPGLYV 65
Fly 66 IDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKNNVFKSEVIQP 130
Fly 131 IFDLA---------------------DPNHPIYHQMPPVGGSGGQGGGVGPGPSSSGALSLADIS 174
Fly 175 SGPNGLN-----------------------SSGMEISMNSSGGDDKMGGA----MPDLSLG---- 208
Fly 209 ---HEKFGGGSSSSKRHYSEQHYSKRQSVVSCSSKTSKSHHHKREYVKSSHDIDYQVREIIEEED 270
Fly 271 EGLQMLMADDHHCMGDDSPPTSSNLLDEKKIKQLLNNPNVLRQLHTLQNFQNLKPQEENQKHRYQ 335
Fly 336 DE--------ALQQHFQNVMKGNAGMPPGMGMGMNMNDSMDLNKDVEFISEQQTI---EVINLDG 389
Fly 390 GDSRSPTPDRDRY---KRSRRNSRSRTRSPRGRGAGGGTGNDRRRRGTRSRSRSRSPRSSRRRGS 451
Fly 452 RDRDRMDRSNRDKERDREHERERRKKGLPDIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGEYG 516
Fly 517 DIVSIDQIVPRGCAFIVMNRRQDAHKAMQALK--NHKLQGRAITISWAAGKGVKSKEWKDYWDLE 579
Fly 580 LGVTYIPWSKLSSDTDFDALEEGGMFDEDTMPIQ---------MKQKINQAKNAAKEHKGASIAE 635
Fly 636 AAGAPSVGVPPPNLIFGIDT--TQP-----PPVGPVGPVGPPPG--PGAPPPGLMGMVRGQF-PM 690
Fly 691 APPMGINMPPPIMMPPTNMPPPM---MMPTTNMPPPM-MMPPTMMPPGF-----PG--IGGPPHP 744
Fly 745 MALPPGAPFPPPGAVPP----------PIPSGGQISNSGNVSDDQMDIEMDLEDAPPL---PP-- 794
Fly 795 --------QQQANFNPSPSNVDLSPAAMANEMFQQRDRERDRDNRDRSRG--------------- 836
Fly 837 -----PGNSRWGGRDDVVEAAERWRAENGGGGGGPGSGLGPN--------AAFNEARARLNLN-- 886
Fly 887 -----------------PIEHGMPRPDFMDFDNRGGPGGPRGMG--------------------- 913
Fly 914 -------PRGNHNGGGPGG-DF-FPPNMNHNRFNQPTSLMQMRIPPPASFNQRMGGPAG-NGGNG 968
Fly 969 VGPMFMRNQGGGPGGAGPSGGGPGGAGTGGGGPG----GRQQGPGFFNPRNPFN----DNQRGRG 1025
Fly 1026 GQSGGGVRGVGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGGPGGNRFRGERGGEMMDDRRGNN 1090
Fly 1091 SRGGRGGPREDRERPGFGNRRGSRDDSNRHSISSTDEGNKAASETEPKPKNVETELGSTNTGAPA 1155
Fly 1156 AATRVDTEEDWDQELQDYEARMEAQKPGERASQ------SANSPP-----------QEKL----P 1199
Fly 1200 AENENFAKPADVTGDPLVAKSQTE 1223 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4266 | NP_001097394.1 | CID | 7..125 | CDD:239621 | 88/117 (75%) |
RRM | <488..>593 | CDD:223796 | 54/106 (51%) | ||
RRM_SCAF4_SCAF8 | 490..566 | CDD:240673 | 35/77 (45%) | ||
DUF2413 | 1147..>1254 | CDD:287302 | 23/98 (23%) | ||
Herpes_DNAp_acc | <1206..1304 | CDD:282746 | 5/18 (28%) | ||
Scaf8 | XP_006227920.3 | CID_SCAF8 | 88..218 | CDD:340801 | 95/129 (74%) |
RRM_SCAF8 | 558..636 | CDD:409895 | 35/77 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166343050 | |
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I6454 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0132 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 459 | 1.000 | Inparanoid score | I1515 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002970 | |
OrthoInspector | 1 | 1.000 | - | - | otm44781 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105962 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1964 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.740 |