| Sequence 1: | NP_001097394.1 | Gene: | CG4266 / 37411 | FlyBaseID: | FBgn0034598 | Length: | 1306 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006523071.1 | Gene: | Scaf4 / 224432 | MGIID: | 2146350 | Length: | 1210 | Species: | Mus musculus |
| Alignment Length: | 1449 | Identity: | 433/1449 - (29%) |
|---|---|---|---|
| Similarity: | 553/1449 - (38%) | Gaps: | 431/1449 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKVPGLYV 65
Fly 66 IDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKNNVFKSEVIQP 130
Fly 131 IFDLADPNHPIYHQMPPVGGSGGQGGGVGPGP-SSSGALSLADISSGPN--GLNSS--------- 183
Fly 184 -----GMEISMNSSGGDDKMGGAMPDLSLGHEKFGGGSSSSKRHYSEQHYSKRQSVVSCSSKTS- 242
Fly 243 ------KSHHHKREYVKSSHDIDYQVREIIEEED------------------------------- 270
Fly 271 ----------------EGLQMLMADDHHCMGDDSPPTSSNLLDEKKIKQLLNNPN----VLRQLH 315
Fly 316 TLQNFQNLKPQEENQKHRYQDEALQQHFQNVMKGNAGMP----------------PGM---GM-- 359
Fly 360 -----------GM----------------------NMNDSMDLNKDVEFISEQQTIEVINLDGGD 391
Fly 392 SRSPTPDRDRYKRSRRNSRSRTRSPRGRGAGGGTGNDRRRRGTRSRSRSRSPRSSRRRG-SRDRD 455
Fly 456 R---MDRSNRDKERDREHERERRKKGLPDIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGD 517
Fly 518 IVSIDQIVPRGCAFIVMNRRQDAHKAMQALK--NHKLQGRAITISWAAGKGVKSKEWKDYWDLEL 580
Fly 581 GVTYIPWSKLSSDTDFDALEEGGMFDEDTMPIQMKQKINQAKNAAKEHKGASIAEAAGAPSVGVP 645
Fly 646 PPNLIFGIDTTQPPPVGPVGPVGPP---PGPGAPP--PGLMGMVRGQFPMAPPMGINMPPPIMMP 705
Fly 706 PTNMPPPMMMPTTNMPPPMMMPPTMMPPGFPGIGGPPH--PMALPPGAPFP--PPGAVPPPIPSG 766
Fly 767 GQISNSGNVSDDQMDIEMDLEDAPPLP---------------PQQQANFNP--SPSNVDLSPAAM 814
Fly 815 ANEMFQQRDRERDRDNRDRSRGPGNSRWGGRDDVVEAAERWRAENGGGGGGPGSGLGPNA-AFNE 878
Fly 879 ARARLNLNPIEH--GMPRPDFMDFDNRGGPGGPRGMGPRGNHNG--GGPGGDFFPPNMNHNRFNQ 939
Fly 940 PTSLMQMRIPPPASFNQRMGGPAGNGGNGVGPMFMRNQGG----------------------GPG 982
Fly 983 GAGPSGGGPGGAGTGGGGPGGRQQGPGFFN-PRNPFNDNQRGRGGQSGGGVRGVGGGGGGGPGGR 1046
Fly 1047 GRWSDDEDEGGNNFKRRGGPGGPGGNRFRGERGGEMMDDRRGNNSRGGRGGPREDRERPGFGNRR 1111
Fly 1112 GSRDDSNRHSISSTDEGNKAASETEPKPKNVETELGSTNTGAPAAATRVDTEEDWDQELQDYEAR 1176
Fly 1177 MEAQKPGERASQSANSPPQEKLPAENENFAKPADVTGDPLVAKSQTETSAACTPLYDELPPPAVP 1241
Fly 1242 QTPTQPPKEPQGS---PPR 1257 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4266 | NP_001097394.1 | CID | 7..125 | CDD:239621 | 86/117 (74%) |
| RRM | <488..>593 | CDD:223796 | 57/106 (54%) | ||
| RRM_SCAF4_SCAF8 | 490..566 | CDD:240673 | 38/77 (49%) | ||
| DUF2413 | 1147..>1254 | CDD:287302 | 18/106 (17%) | ||
| Herpes_DNAp_acc | <1206..1304 | CDD:282746 | 13/55 (24%) | ||
| Scaf4 | XP_006523071.1 | CID_SFRS15_SCAF4 | 5..135 | CDD:340802 | 93/129 (72%) |
| PAT1 | <303..>484 | CDD:370676 | 28/181 (15%) | ||
| RRM_SCAF4 | 570..650 | CDD:240907 | 40/79 (51%) | ||
| SF-CC1 | 1060..>1172 | CDD:273721 | 34/144 (24%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167839245 | |
| Domainoid | 1 | 1.000 | 131 | 1.000 | Domainoid score | I5131 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0132 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 456 | 1.000 | Inparanoid score | I1572 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0002970 | |
| OrthoInspector | 1 | 1.000 | - | - | otm42716 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1302 |
| SonicParanoid | 1 | 1.000 | - | - | X1964 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 11 | 10.870 | |||||