DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNA5 and Shawl

DIOPT Version :9

Sequence 1:NP_002225.2 Gene:KCNA5 / 3741 HGNCID:6224 Length:613 Species:Homo sapiens
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:566 Identity:185/566 - (32%)
Similarity:256/566 - (45%) Gaps:152/566 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   121 RVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRL 185
            |:.:|:||:|:||...||.:.|.|.|....:.|..:||:.|||||||:...|..||.||:: |:|
  Fly     6 RIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNYYRT-GKL 69

Human   186 RRPVNVSLDVFADEIRFYQLGDEAMER--------FREDEGFIK-------EEEKPLPR------ 229
            ..|.:|...:|.:|:.|:.|....:|.        .|:.:..:.       |.|||...      
  Fly    70 HYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEEQIARLF 134

Human   230 -----------NEFQR---QVWLIFEYPESSGSARAIAIVSVLVILISIITFCLETLPEFRDERE 280
                       |.:||   ::|.:|:.|.||..|:.:|.:||..|.:|:|:|||:|.|.||.:..
  Fly   135 GFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHPGFRVDLP 199

Human   281 LLRH---------PPAPHQPPAPAPGAN--GSGVMAPPS---GPT-------------------V 312
            ...|         ||..|.|....|..:  ....:.|||   |||                   .
  Fly   200 SGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGNFTASGQA 264

Human   313 APL----------LPR----------------------------TLADP---FFIVETTCVIWFT 336
            .|:          |.|                            |...|   ||.||..|.:||.
  Fly   265 TPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYVELVCNVWFF 329

Human   337 FELLVRFFACPSKAGFSRNIMNIIDVVAIFPYFITLGTELAEQQPGGGGGGQNGQQAMSLAILRV 401
            .|:::|....|:...|.::.:||||..|...::..:...:.|.                ..:|..
  Fly   330 IEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRMGEY----------------TGLLEA 378

Human   402 IRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE--ADNQGTHF 464
            ..:||:.|:|||:|||.||:||..|.:||.:||.||:|||.:|::.|:|..|:||  .||....|
  Fly   379 FSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQF 443

Human   465 SSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY-HRETD 528
            .|||...|||:||||||||||:.|.|..|..||:|||:|||||||||||||||||:.|| |.:..
  Fly   444 KSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQAR 508

Human   529 HEEP----AVLKEEQ-------------------GTQSQGPGLDRG 551
            .:.|    .||..||                   .|...||||..|
  Fly   509 SKLPKKRRRVLPVEQPRRKREPTAPHRGRTNAIKQTPPTGPGLVAG 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNA5NP_002225.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108
2 X 11 AA tandem repeat of D-[SP]-G-V-R-P-L-P-P-L-P 61..82
BTB_2 122..213 CDD:308049 35/98 (36%)
Ion_trans 249..526 CDD:306908 125/353 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..304 6/32 (19%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 418..431 6/12 (50%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 480..485 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..559 11/43 (26%)
PDZ-binding. /evidence=ECO:0000250 611..613
ShawlNP_001097131.2 BTB 7..99 CDD:197585 35/92 (38%)
BTB_2 7..97 CDD:280393 35/90 (39%)
Ion_trans 307..506 CDD:278921 96/214 (45%)
Ion_trans_2 <449..499 CDD:285168 37/49 (76%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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