DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNA5 and Shab

DIOPT Version :10

Sequence 1:NP_002225.2 Gene:KCNA5 / 3741 HGNCID:6224 Length:613 Species:Homo sapiens
Sequence 2:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster


Alignment Length:673 Identity:212/673 - (31%)
Similarity:306/673 - (45%) Gaps:173/673 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    13 AMTVRGGDEARAGCGQATGGELQCPPTAGLSDGPKEPAPKGRGAQRDADSGVRPLP-PLPDPGVR 76
            |..|..|..|.||.|.:..|.   ...||...|....:..|.||   |...||..| |:..| ..
  Fly   181 AGAVGSGAGAGAGAGASVTGS---GSGAGTGTGTGAGSGSGSGA---AGKEVRYAPFPVASP-TH 238

Human    77 PLPPLPEELPRPRRPPPEDEEEEGDPGLGTVEDQAL-GTASLHHQ-------------------- 120
            .:|...:::          ....|..|:|....|:: |....|.|                    
  Fly   239 SIPTTSQQI----------VGSVGGVGVGGASSQSISGGVPTHSQSNTTGALQRTHSRSMSSIPP 293

Human   121 --------------RVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRY-------------FDP 158
                          ||.||:.|:|.|....||.:.|:|.||    |||.             :..
  Fly   294 PEPFMIAQSKAVNSRVSINVGGVRHEVLWRTLERLPHTRLG----RLRECTTHEAIVELCDDYSL 354

Human   159 LRNEYFFDRNRPSFDGILYYYQSGGRLRRPVNVSLDVFADEI----------------RFYQLGD 207
            ..|||||||:..||..||.:|:: |:|.....:.:..|:|::                :::|..:
  Fly   355 ADNEYFFDRHPKSFSSILNFYRT-GKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKE 418

Human   208 EAMERFR-EDEGFIKEEEKPLPRN---EFQRQVWLIFEYPESSGSARAIAIVSVLVILISIITFC 268
            ...|..| |.|...:.:|:.....   |:|:.:|.:.|.|.:|.:||.||::|:|.|::|.|...
  Fly   419 NVHEEMRKEAESLRQRDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALT 483

Human   269 LETLPEFRDERELLRHPPAPHQPPAPAPGANGSGVMAPPSGPTVAPLLPRTLADPFFIVETTCVI 333
            |.|||:       |:|..            ||:    |...|.:|            :||..|:.
  Fly   484 LNTLPQ-------LQHID------------NGT----PQDNPQLA------------MVEAVCIT 513

Human   334 WFTFELLVRFFACPSKAGFSRNIMNIIDVVAIFPYFITLGTELAEQQPGGGGGGQNGQQAMSLAI 398
            |||.|.::||.|.|.|..|.:..:||||::||.|||::|  .|.|.........|:.::     :
  Fly   514 WFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSL--FLLETNKNATDQFQDVRR-----V 571

Human   399 LRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGTH 463
            ::|.|::|:.||.||:|||.|||.||.||:.|.:|||||:.||.:||::|||..||||.|.:.|.
  Fly   572 VQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTK 636

Human   464 FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETD 528
            |.|||:.||||.:|||||||||:.|.|..||::|::|.|.|||.||||:|:||:||..||..:..
  Fly   637 FVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMR 701

Human   529 HEEPAVLKEEQGTQSQGPGLDRGVQRKVSGSRGSFCKAGGTLENADSARRGSCPLEKCNVK---A 590
            .|:  .||..:       .|||.   |..||..||                    ...|:|   |
  Fly   702 REK--ALKRRE-------ALDRA---KREGSIVSF--------------------HHINLKDAFA 734

Human   591 KSNVDLRRSLYALCLDTSRETDL 613
            ||     ..|..:.:||.::|::
  Fly   735 KS-----MDLIDVIVDTGKQTNV 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNA5NP_002225.2 Tetramerization domain. /evidence=ECO:0000305|PubMed:20018952 1..211 61/262 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108 24/95 (25%)
2 X 11 AA tandem repeat of D-[SP]-G-V-R-P-L-P-P-L-P 61..82 6/21 (29%)
BTB_POZ 120..246 CDD:453885 44/192 (23%)
Ion_trans 249..526 CDD:459842 120/276 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..304 4/21 (19%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 418..431 7/12 (58%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 480..485 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..559 6/26 (23%)
PDZ-binding. /evidence=ECO:0000250 611..613 1/1 (100%)
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 32/112 (29%)
Ion_trans 464..700 CDD:459842 120/277 (43%)

Return to query results.
Submit another query.