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Protein Alignment Hmg-2 and Tfam
DIOPT Version :9
Sequence 1: | NP_611553.1 |
Gene: | Hmg-2 / 37407 |
FlyBaseID: | FBgn0026582 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_112616.2 |
Gene: | Tfam / 83474 |
RGDID: | 620682 |
Length: | 244 |
Species: | Rattus norvegicus |
Alignment Length: | 171 |
Identity: | 48/171 - (28%) |
Similarity: | 66/171 - (38%) |
Gaps: | 51/171 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 76 PKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPE-ERKL----------PYIEAA 129
||.|::.|:||..::..:.:.:.|.....|..|.|...|.:||| |:|: .|.||.
Rat 49 PKKPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVYKEAV 113
Fly 130 AKDKAIYQEQL-------------QMFLKEHPEIVANELAKAKKATKLDGSPKE----------- 170
:| |:||| |..||:..:|...||. |.|.||.
Rat 114 SK----YKEQLTPSQLMGLEKEARQKRLKKKAQIKRRELI-------LLGKPKRPRSAYNIYVSE 167
Fly 171 --KTPKGESALGKAKKTKAKPVKRQSEDPDD--VPLAKVKR 207
:..|.|||.||.|... :..|..|.|... :.|||..|
Rat 168 SFQEAKDESAQGKLKLVN-QAWKNLSHDEKQAYIQLAKDDR 207
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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