Protein Alignment Hmg-2 and HMGB6

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_568431.1
• Gene: HMGB6 / 832408
• AraportID: AT5G23420
• Length: 241
• Species: Arabidopsis thaliana
• Alignment Length: 188
• Identity: 45/188 - (23%)
• Similarity: 85/188 - (45%)
• Gaps: 18/188 - (9%)

  Fly    14 ESPVSLPIASQSMDTATIEDFDEDKPAKGKKKAKNPKGRHSDSDIGSELKKL--AQRRINVAGAP 76
            ::.:.:.:.:|.::|          .|:.|||....|...||......|||.  .::..:.:..|
plant    61 DAKIRVNLEAQVVET----------QAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKP 115

  Fly    77 KMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQ 141
            |.||..:..||:|.|:..:.|.....|.:..:|.||:|..|.||.|..|::.||:.||.|.:.|
plant   116 KRPLTAFFIFMSDFRKTFKSEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSL- 179

  Fly   142 MFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDD 199
                |..:....|..:.|::..:|.: :||....:..:.:.:.......|:::|..::
plant   180 ----ESNDADEEEEDEEKQSDDVDDA-EEKQVDDDDEVEEKEVENTDDDKKEAEGKEE 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	26/78 (33%)
HMGB6	NP_568431.1	HMG-box_AtHMGB1-like	116..175	CDD:438821	22/58 (38%)