Protein Alignment Hmg-2 and Ssrp1

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: XP_038961847.1
• Gene: Ssrp1 / 81785
• RGDID: 621143
• Length: 805
• Species: Rattus norvegicus
• Alignment Length: 239
• Identity: 56/239 - (23%)
• Similarity: 97/239 - (40%)
• Gaps: 49/239 - (20%)

  Fly    10 DAVPESPVSLPIASQSMDTATIEDFD----------------EDKPAKGKKKAKNPKGRHSDSDI 58
            |:..|:..|.....:..|.|  |:||                |:|..|..|:||..|.|.|...
  Rat   569 DSGEETDESFNPGEEEEDVA--EEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKK- 630

  Fly    59 GSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKL 123
            .||.||...     ..|||.|::.|:.::|..||:::.:.|..:..:.::..||.|..:.:|:|.
  Rat   631 SSEGKKGKD-----PNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKE 690

  Fly   124 PYIEAAAKDKAIYQEQLQMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAK----- 183
            .:...|...:..|::.::.:.....:....:.:|.||..|.....|....:|.|:...::
  Rat   691 EWDRKAEDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVKAKLEKKSTPSRGSSSKSSSRQLSDS 755

  Fly   184 ---------------KTKAKPVKRQSEDPDDVPLAKVKRAQTPP 212
                           :.|:|..:|:|||.|:..|     |.|||
  Rat   756 FKSKEFVSSDESSSGENKSKKKRRRSEDSDEEEL-----ASTPP 794

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	15/64 (23%)
Ssrp1	XP_038961847.1	POB3	114..576	CDD:227494	2/6 (33%)
		HMG_box	643..710	CDD:395407	15/66 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334384
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930