Protein Alignment Hmg-2 and HMGB4

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_179347.1
• Gene: HMGB4 / 816263
• AraportID: AT2G17560
• Length: 138
• Species: Arabidopsis thaliana
• Alignment Length: 159
• Identity: 35/159 - (22%)
• Similarity: 62/159 - (38%)
• Gaps: 26/159 - (16%)

  Fly    42 GKKKAKNPKGRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEH 106
            |:.||   :...:|..:.:..:|..::.......||.|.:.:..|:.|.|:|.....|...::..
plant     4 GESKA---EATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVAT 65

  Fly   107 T-RIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMF-LKEHPEIVANELAKAKKATKLDGSPK 169
            . :..|..|..:.:|.|.||:..|...|..|.:.:|.: ||         ||......: |.|.|
plant    66 VGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLK---------LASGTNREE-DDSDK 120

  Fly   170 EKTPKGESALGKAKKTKAKPVKRQSEDPD 198
            .|:...|:.           .:.::||.|
plant   121 SKSEVDEAV-----------SEEEAEDDD 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	20/80 (25%)
HMGB4	NP_179347.1	HMG-box_AtHMGB1-like	36..96	CDD:438821	15/59 (25%)