Protein Alignment Hmg-2 and hmgb2a

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001032501.1
• Gene: hmgb2a / 641484
• ZFINID: ZDB-GENE-051120-126
• Length: 213
• Species: Danio rerio
• Alignment Length: 169
• Identity: 40/169 - (23%)
• Similarity: 66/169 - (39%)
• Gaps: 43/169 - (25%)

  Fly    31 IEDFDEDKPAKGKKKAKNPKGRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELR 95
            ::::...|.|||.||.|:|                        .|||.|.:.:..|.:|.|.:::
Zfish    74 MKNYVPPKGAKGGKKKKDP------------------------NAPKRPPSAFFVFCSDHRPKVK 114

  Fly    96 REQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLKEHPEIVANELAKAKK 160
            .:.|..:..:..:.:||.|.:|..:.|.||.:.|.|.|..|::.:              .|...|
Zfish   115 GDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKLKEKYEKDV--------------AAYRAK 165

  Fly   161 ATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDD 199
            ..|.||:     .||.......||.:|.....:.||.:|
Zfish   166 GVKPDGA-----KKGGPGRPAGKKAEADDDDDEDEDEED 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	18/64 (28%)
hmgb2a	NP_001032501.1	HMG_box_2	6..77	CDD:286146	0/2 (0%)
		HMG_box	95..162	CDD:278906	18/80 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.930