Protein Alignment Hmg-2 and tfam

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001070857.1
• Gene: tfam / 571106
• ZFINID: ZDB-GENE-061013-552
• Length: 277
• Species: Danio rerio
• Alignment Length: 306
• Identity: 67/306 - (21%)
• Similarity: 119/306 - (38%)
• Gaps: 87/306 - (28%)

  Fly    74 GAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQE 138
            |.||.||..|:.|:.|.:..:.::.|...:::..|.|.::|..|..|:|.|:..|:.:.|..|:.
Zfish    45 GPPKRPLTAYMTFVKDMQPTVSKQNPSIKSVDVMRKIAQQWKMLTTEQKQPFQVASLEAKEQYKL 109

  Fly   139 QLQMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKK---TKAKPVKRQSEDPDDV 200
            .|:.|                ||        :.||...:|..:.|:   .|.|.::::.|..:
Zfish   110 ALEKF----------------KA--------QLTPAESAAFAEEKRQRVAKRKAIRKKKELNN-- 148

  Fly   201 PLAKVKRAQTPPPPTPPAAPVQPPPSSVPPATPAPRPLQPGEIPIYTNE-FIE-HNRSTENELRT 263
             |.|.||                           ||    ....|:..| |:| ...:|:.:|::
Zfish   149 -LGKPKR---------------------------PR----STFNIFMAEHFVEAKGTTTQAKLKS 181

  Fly   264 LR---KAKTDLEQQNAVLEQHVDNTKAGYAKVMGEVTELMEENQRLETYLRALRQKLVAALGGIS 325
            ||   ...:|.::|..:  |..::.|..|...:....|.|.|..|.:    .||:|..:||
Zfish   182 LRDDWNRLSDTQKQMYI--QLAEDDKVRYKNEIKSWEEHMMEIGRED----LLRRKTKSAL---- 236

  Fly   326 MPPLEPSGPSVGNIDKYIRHLAGLVTQPSNVTLIKAREALRKVDTS 371
              ..:....::...::         .:.|.||:|||:...:|.|.|
Zfish   237 --KAKAKTKTIATKNR---------KKTSKVTVIKAKAPKKKKDAS 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	18/64 (28%)
tfam	NP_001070857.1	HMG_box	47..114	CDD:278906	19/66 (29%)
		HMGB-UBF_HMG-box	152..213	CDD:238686	17/93 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810