Protein Alignment Hmg-2 and hmgb3b

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001017769.1
• Gene: hmgb3b / 550466
• ZFINID: ZDB-GENE-050417-290
• Length: 198
• Species: Danio rerio
• Alignment Length: 185
• Identity: 33/185 - (17%)
• Similarity: 64/185 - (34%)
• Gaps: 48/185 - (25%)

  Fly    28 TATIEDFDEDKPAKGKKKAKNPKGRHSDSDIGSELK-------------KLAQRRINVAGAPKMP 79
            |....:|  .|....:.|..:||.:....|:..:.|             |..:::.....||:.|
Zfish    35 TVNFSEF--SKKCSERWKTMSPKEKTKFEDLAKQDKARYDQEMMHYNPGKKGRKQKKDPNAPRRP 97

  Fly    80 LNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFL 144
            .:|:..|..::|..::.:.|.....:..:.:|..|:.|.:..|.|::..|.|.|..||:.:..:.
Zfish    98 PSGFFLFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKYQKDMAFYR 162

  Fly   145 KEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDD 199
            |:                                 |....:.||...:..:|.||
Zfish   163 KK---------------------------------GSGGSSSAKSEPKDDDDDDD 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	16/64 (25%)
hmgb3b	NP_001017769.1	HMG_box_2	7..78	CDD:286146	8/44 (18%)
		HMG_box	94..161	CDD:278906	16/66 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900