Protein Alignment Hmg-2 and RGD1559962

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: XP_008756867.1
• Gene: RGD1559962 / 498988
• RGDID: 1559962
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 207
• Identity: 44/207 - (21%)
• Similarity: 80/207 - (38%)
• Gaps: 61/207 - (29%)

  Fly    13 PESPVSLPIASQ----------SMDTATIEDFDEDKPAKGKKKAKN---PKGRHSDSDIGSELKK 64
            |:|.|:....|:          :.:.:..||..:...|:..::.||   |||.          ||
  Rat    32 PDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDREMKNYVPPKGD----------KK 86

  Fly    65 LAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAA 129
            ..::..|   |||.|.:.:..|.::.|.:::.|.|..:..:..:.:||.|.:...:.|.||.:.|
  Rat    87 GKKKDPN---APKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKA 148

  Fly   130 AKDKAIYQEQLQMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGK-------AKKTKA 187
            ||.|..|::.:..:                            ..||:|.:||       ..|.|.
  Rat   149 AKLKEEYEKDIAAY----------------------------RAKGKSEVGKKGPGRPTGSKKKN 185

  Fly   188 KPVKRQSEDPDD 199
            :|...:.|:.:|
  Rat   186 EPEDEEEEEEED 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	18/64 (28%)
RGD1559962	XP_008756867.1	HMG-box	7..78	CDD:294061	8/45 (18%)
		HMG_box	95..162	CDD:278906	18/66 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900