Protein Alignment Hmg-2 and Hmgb2l1

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001316810.1
• Gene: Hmgb2l1 / 498072
• RGDID: 1564519
• Length: 210
• Species: Rattus norvegicus
• Alignment Length: 200
• Identity: 44/200 - (22%)
• Similarity: 82/200 - (41%)
• Gaps: 45/200 - (22%)

  Fly    13 PESPVSLPIASQ----------SMDTATIEDFDEDKPAKGKKKAKN---PKGRHSDSDIGSELKK 64
            |:|.|:....|:          :.:.:..||..:...|:..::.||   |||.          ||
  Rat    32 PDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDREMKNYVPPKGD----------KK 86

  Fly    65 LAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAA 129
            ..::..|   |||.|.:.:..|.::.|.:::.|.|..:..:..:.:||.|.:...:.|.||.:.|
  Rat    87 GKKKDPN---APKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKA 148

  Fly   130 AKDKAIYQEQLQMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQS 194
            ||.|..|::.:..:..:         .|::...|..|.|          .|..||.:.:..:.:.
  Rat   149 AKLKEKYEKDIAAYRAK---------GKSEVGKKGPGRP----------TGSKKKNEPEDEEEEE 194

  Fly   195 EDPDD 199
            |:.||
  Rat   195 EEEDD 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	19/78 (24%)
Hmgb2l1	NP_001316810.1	HMG-box_HMGB_rpt1	8..76	CDD:438794	7/43 (16%)
		HMG-box_HMGB_rpt2	93..163	CDD:438795	20/72 (28%)