Protein Alignment Hmg-2 and ssrp1b

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: XP_001923156.3
• Gene: ssrp1b / 449949
• ZFINID: ZDB-GENE-041008-209
• Length: 703
• Species: Danio rerio
• Alignment Length: 216
• Identity: 54/216 - (25%)
• Similarity: 89/216 - (41%)
• Gaps: 43/216 - (19%)

  Fly    22 ASQSMDTATIEDFDEDKPAKGKKKAKNPKGRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRF 86
            ||.|..:|...|.|||:..|..||.|..|.|       ...||  ::::..:||||.|::.|:.:
Zfish   498 ASASESSAEEGDSDEDRKKKSAKKVKFVKER-------KPRKK--EKKVKDSGAPKRPMSAYMLW 553

  Fly    87 MNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLKEHPEIV 151
            :|..|:.::.|.|..:..|.::..||.|.||.:::|..:...|.:.|..|...    ::|:.|..
Zfish   554 LNSSRDRIKSENPGISITEISKKAGEMWKQLGKDKKEEWDGKAEEAKKEYDRA----MREYRESG 614

  Fly   152 ANELAKAKKATKLDGSPKEKTPKGESALGKAKK-------------------------TKAKPVK 191
            ......:||..|......|:..|.:|..|:.|:                         .|.|..|
Zfish   615 GGSSGSSKKERKKKRGRNEEKRKRKSGAGREKEKERSTGNDSFKSREFISSEESSSESDKGKKRK 679

  Fly   192 RQSEDPDDVPLAKVKRAQTPP 212
            |:..|.:     |.:.|.:.|
Zfish   680 RKGSDNE-----KEEEAVSTP 695

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	21/78 (27%)
ssrp1b	XP_001923156.3	POB3	21..514	CDD:227494	7/15 (47%)
		HMG-box_SSRP1-like	545..611	CDD:438810	17/69 (25%)