Protein Alignment Hmg-2 and D

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_524066.1
• Gene: D / 39570
• FlyBaseID: FBgn0000411
• Length: 382
• Species: Drosophila melanogaster
• Alignment Length: 186
• Identity: 40/186 - (21%)
• Similarity: 71/186 - (38%)
• Gaps: 38/186 - (20%)

  Fly    74 GAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQE 138
            |..|.|:|.::.:...:|.::.::.|:....|.::.:|.||..|.|..|.|:|:.|.:.:|::
  Fly   140 GHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALH-- 202

  Fly   139 QLQMFLKEHPEIVANELAKAKK---ATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDP--- 197
                 :||||:.......|.|.   |....|...:....|:..||......|.......:.|
  Fly   203 -----MKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPGAGAGGYNPFHQLPPYF 262

  Fly   198 ------------------DDVPLAKVKRAQTPPPPT-------PPAAPVQPPPSSV 228
                              |.:.|:|:.::|......       ...||.|.||:|:
  Fly   263 APSHHLDQGYPVPYFGGFDPLALSKLHQSQAAAAAAVNNQGQQQGQAPPQLPPTSL 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	20/78 (26%)
D	NP_524066.1	HMG-box_SoxB	140..219	CDD:438790	22/85 (26%)