Protein Alignment Hmg-2 and hmg20a

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001082803.1
• Gene: hmg20a / 326908
• ZFINID: ZDB-GENE-030131-5107
• Length: 291
• Species: Danio rerio
• Alignment Length: 345
• Identity: 96/345 - (27%)
• Similarity: 157/345 - (45%)
• Gaps: 86/345 - (24%)

  Fly    36 EDKP-----AKGKKKAKNPKGRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELR 95
            ::||     .||:::.|..|    ||:                 |||.||.|||||||:|||:||
Zfish    21 DEKPRRSSWTKGRRRKKPLK----DSN-----------------APKAPLTGYVRFMNERREQLR 64

  Fly    96 REQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLK-EHPEIVANELAKAK 159
            .|:|.....|.||::|.||.:||.:.|..|::.|.|||..|..:|:.:.| |..:..:.::.:.:
Zfish    65 AERPDVPFPEITRMLGNEWSKLPADEKQRYLDEADKDKERYMRELEQYQKTEAYKHFSRKVQEKQ 129

  Fly   160 KATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDDVPLAKVKRAQTPPPPTPPAAPVQPP 224
            |..:..|....:.| |||...|..:||.:.|
Zfish   130 KGKRHRGDAGRQAP-GESLHEKDLETKDRSV---------------------------------- 159

  Fly   225 PSSVPPATPAPRPLQPGEIPIYTNEFIEHNRSTENELRTLRKAKTDLEQQNAVLEQHVDNTKAGY 289
                            .:|||:|.||:.|:::.|.|:|.|||...:.|::||.|::||::.::..
Zfish   160 ----------------FDIPIFTEEFLNHSKAREAEMRQLRKTNMEYEERNAALQKHVESMRSAV 208

  Fly   290 AKVMGEVTELMEENQRLETYLRALRQKLVAALGGISMPPLEPSG--PSVGNIDKYIRHLAGLV-- 350
            .::.|:|.:....|..|..:|..||..|..:   .|..||..||  |::.:||.|::.|..|:
Zfish   209 ERLEGDVLQERTRNSLLLQHLETLRSALTHS---FSTVPLPGSGETPTLESIDSYMKKLHSLILS 270

  Fly   351 -TQPSNVTLIKAREALRKVD 369
             .|.....:...|:.:.::|
Zfish   271 SPQDHQHLISTVRDVVNRLD 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	33/64 (52%)
hmg20a	NP_001082803.1	HMGB-UBF_HMG-box	45..110	CDD:238686	33/64 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	83	1.000	Domainoid score	I8289
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H32399
Inparanoid	1	1.050	126	1.000	Inparanoid score	I4669
OMA	1	1.010	-	-		QHG45555
OrthoDB	1	1.010	-	-		D1458939at2759
OrthoFinder	1	1.000	-	-		FOG0003510
OrthoInspector	1	1.000	-	-		otm25636
orthoMCL	1	0.900	-	-		OOG6_106551
Panther	1	1.100	-	-	O	PTHR46040
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	1	1.000	-	-		X2882
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	15	14.870