Protein Alignment Hmg-2 and hmgb1a

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_955849.2
• Gene: hmgb1a / 321622
• ZFINID: ZDB-GENE-030131-341
• Length: 205
• Species: Danio rerio
• Alignment Length: 200
• Identity: 48/200 - (24%)
• Similarity: 79/200 - (39%)
• Gaps: 55/200 - (27%)

  Fly    13 PESPVSLPIASQ----------SMDTATIEDFDEDKPAKGKKKAKN---PKGRHSDSDIGSELKK 64
            ||:.|:....|:          :.:....||..:...|:.:::.||   |||         |.||
Zfish    31 PEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYEREMKNYIPPKG---------EKKK 86

  Fly    65 LAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAA 129
                |.....|||.|.:.:..|.::.|.:::.|.|..:..:..:.:||.|:::..|.|.||.:.|
Zfish    87 ----RFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPYEKKA 147

  Fly   130 AKDKAIYQEQLQMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQS 194
            ||.|..|::.:..:                            ..||:.. |.|.|..:||.|...
Zfish   148 AKLKEKYEKDIAAY----------------------------RSKGKVG-GGAAKAPSKPDKAND 183

  Fly   195 EDPDD 199
            ||.||
Zfish   184 EDEDD 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	19/64 (30%)
hmgb1a	NP_955849.2	HMG-box	7..77	CDD:320749	8/45 (18%)
		HMG_box	94..161	CDD:278906	19/66 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.030