DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmg-2 and TOX3

DIOPT Version :9

Sequence 1:NP_611553.1 Gene:Hmg-2 / 37407 FlyBaseID:FBgn0026582 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001073899.2 Gene:TOX3 / 27324 HGNCID:11972 Length:576 Species:Homo sapiens


Alignment Length:350 Identity:74/350 - (21%)
Similarity:129/350 - (36%) Gaps:83/350 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TSKTPDAVPESPVSLPIASQSMDTATIEDFDEDKPAKGKKKAKNPKGRHSDSDIGSELKKLAQRR 69
            ||.:|   |.|..:.|..|.|::.   ||.||...|.|:|:|.        .|.|.:.|...:::
Human   198 TSPSP---PASKSATPSPSSSINE---EDADEANRAIGEKRAA--------PDSGKKPKTPKKKK 248

  Fly    70 INVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKA 134
            ......|:.|::.|..|..|.:..::.:.|..|..|.::|:...|..|.||:|..|   ..|.:|
Human   249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVY---KRKTEA 310

  Fly   135 IYQEQLQMFLKEHPEIVANELAKAKKA------------TKLDGSPKEKTPKGESALGKAKKTKA 187
            ..:|.|:........:|:...|::.:|            |.|..|....||     |.:.....|
Human   311 AKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNTP-----LSQHGTVSA 370

  Fly   188 KPVKRQSEDPDDVPLAKVKRAQTPPPPTPPAAPVQPPPSSVPPATPAP----RPL-------QPG 241
            .|...|...|..:          .|.|.....|:....:||..|...|    .||       ..|
Human   371 SPQTLQQSLPRSI----------APKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVG 425

  Fly   242 EIP-------IYTNEFIEHNRSTENELRTLRKAKTDLEQQNAVLEQHVDNTKAGYAKVMGEVTEL 299
            ..|       :.|.   :|....:.:.:..::....::||.  |:||         ::..::.:.
Human   426 SAPSTQVSPSVQTQ---QHQMQLQQQQQQQQQQMQQMQQQQ--LQQH---------QMHQQIQQQ 476

  Fly   300 MEE-------NQRLETYLRALRQKL 317
            |::       .|.|:...:.|:|::
Human   477 MQQQHFQHHMQQHLQQQQQHLQQQI 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmg-2NP_611553.1 HMGB-UBF_HMG-box 76..141 CDD:238686 18/64 (28%)
TOX3NP_001073899.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..258 20/73 (27%)
HMG-box 255..320 CDD:238037 19/67 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..443 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 519..563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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