Protein Alignment Hmg-2 and Tfam

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_033386.1
• Gene: Tfam / 21780
• MGIID: 107810
• Length: 243
• Species: Mus musculus
• Alignment Length: 257
• Identity: 53/257 - (20%)
• Similarity: 99/257 - (38%)
• Gaps: 71/257 - (27%)

  Fly    76 PKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQL 140
            ||.|::.|:||..::..:.:.:.|.....|..|.|...|.:|||           .:|.:|:...
Mouse    49 PKKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPE-----------AEKKVYEADF 102

  Fly   141 QMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDDVPLAKV 205
            :...|.:.|.|    :|.|         ::.||  ...:|..|:.:.:.:|::         |.|
Mouse   103 KAEWKAYKEAV----SKYK---------EQLTP--SQLMGMEKEARQRRLKKK---------ALV 143

  Fly   206 KRAQ---TPPPPTPPAAPVQPPPSSVPPATPAPRPLQPGEIPIYTNEFIEHNR--STENELRTLR 265
            ||.:   ...|..|.:|                       ..||.:|..:..:  |.:.:|:.:.
Mouse   144 KRRELILLGKPKRPRSA-----------------------YNIYVSESFQEAKDDSAQGKLKLVN 185

  Fly   266 KAKTDL--EQQNAVLEQHVDNTKAGYAKVMGEVTELMEENQRLETYLRALRQKLVAALGGIS 325
            :|..:|  |::.|.::...|: :..|...|....|.|.|..|.:...|::::.     |.||
Mouse   186 EAWKNLSPEEKQAYIQLAKDD-RIRYDNEMKSWEEQMAEVGRSDLIRRSVKRS-----GDIS 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	19/77 (25%)
Tfam	NP_033386.1	HMG_box	49..116	CDD:459837	19/81 (23%)
		HMG-box_SF	134..232	CDD:469606	24/130 (18%)