Protein Alignment Hmg-2 and hmg-1.2

DIOPT Version :10

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001380090.1
• Gene: hmg-1.2 / 175890
• WormBaseID: WBGene00001972
• Length: 235
• Species: Caenorhabditis elegans
• Alignment Length: 197
• Identity: 41/197 - (20%)
• Similarity: 73/197 - (37%)
• Gaps: 56/197 - (28%)

  Fly     4 PTSKTPDAVPESPVSLPIASQSMDTATIEDFDEDKPAKGK--------------KKAKNPKGRHS 54
            |:|.:| .:.:|....|..|.:|..||..|..: .|.:||              .|.|.|.....
 Worm    11 PSSSSP-TLYQSHQLQPNPSATMYQATPRDMGK-PPVRGKTSPYGFFVKMCYEEHKKKYPNENVQ 73

  Fly    55 DSDIGSELK---------------KLAQR-------RINVAG------------------APKMP 79
            .::|..:..               :|||:       .::||.                  |||..
 Worm    74 VTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRA 138

  Fly    80 LNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFL 144
            |:.:..:..|:|.|::...|.....:..:.:|:.|..:|:|.|..|.:.|..||..|.::::.:.
 Worm   139 LSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 203

  Fly   145 KE 146
            .|
 Worm   204 AE 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	19/72 (26%)
hmg-1.2	NP_001380090.1	HMG-box_HMGB_rpt1	44..112	CDD:438794	10/67 (15%)
		HMG-box_SF	124..202	CDD:469606	18/77 (23%)