Protein Alignment Hmg-2 and hmg-1.2

DIOPT Version :9

• Sequence 1: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001380090.1
• Gene: hmg-1.2 / 175890
• WormBaseID: WBGene00001972
• Length: 235
• Species: Caenorhabditis elegans
• Alignment Length: 197
• Identity: 41/197 - (20%)
• Similarity: 73/197 - (37%)
• Gaps: 56/197 - (28%)

  Fly     4 PTSKTPDAVPESPVSLPIASQSMDTATIEDFDEDKPAKGK--------------KKAKNPKGRHS 54
            |:|.:| .:.:|....|..|.:|..||..|..: .|.:||              .|.|.|.....
 Worm    11 PSSSSP-TLYQSHQLQPNPSATMYQATPRDMGK-PPVRGKTSPYGFFVKMCYEEHKKKYPNENVQ 73

  Fly    55 DSDIGSELK---------------KLAQR-------RINVAG------------------APKMP 79
            .::|..:..               :|||:       .::||.                  |||..
 Worm    74 VTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRA 138

  Fly    80 LNGYVRFMNDRREELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFL 144
            |:.:..:..|:|.|::...|.....:..:.:|:.|..:|:|.|..|.:.|..||..|.::::.:.
 Worm   139 LSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 203

  Fly   145 KE 146
            .|
 Worm   204 AE 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmg-2	NP_611553.1	HMGB-UBF_HMG-box	76..141	CDD:238686	17/64 (27%)
hmg-1.2	NP_001380090.1	HMGB-UBF_HMG-box	50..112	CDD:238686	7/61 (11%)
		HMGB-UBF_HMG-box	135..200	CDD:238686	17/64 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940