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Protein Alignment Hmg-2 and hmg-1.1
DIOPT Version :9
Sequence 1: | NP_611553.1 |
Gene: | Hmg-2 / 37407 |
FlyBaseID: | FBgn0026582 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001370073.1 |
Gene: | hmg-1.1 / 175081 |
WormBaseID: | WBGene00001971 |
Length: | 95 |
Species: | Caenorhabditis elegans |
Alignment Length: | 119 |
Identity: | 26/119 - (21%) |
Similarity: | 46/119 - (38%) |
Gaps: | 39/119 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 KPAKGKK-----------KAKNPKGRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRR 91
|.|.||| |||:| .|||..::.:..:|.:.|
Worm 3 KAAAGKKASPVKRVKKGGKAKDP------------------------NAPKRAMSAFFFWMQENR 43
Fly 92 EELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLK 145
|.::: |.....:..:..|.||.:|.::.: :.:.||.||..|:..:..:.|
Worm 44 ERIKK--PGMGVADVAKAAGVEWGKLTDKSR--WEKKAADDKKRYEVDIANYKK 93
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3288 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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