DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9406 and CAM6

DIOPT Version :10

Sequence 1:NP_611552.1 Gene:CG9406 / 37405 FlyBaseID:FBgn0034592 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_850860.1 Gene:CAM6 / 832245 AraportID:AT5G21274 Length:149 Species:Arabidopsis thaliana


Alignment Length:156 Identity:48/156 - (30%)
Similarity:76/156 - (48%) Gaps:17/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LNNELEEKISEAFCIFDTHGDKYIDSRNVGNVLRFLGCAPTEKEVEDVIKATD-----SVDYPGE 66
            |.::...:..|||.:||..||..|.::.:|.|:|.||..|||.|::|:|...|     ::|:|  
plant     5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP-- 67

  Fly    67 AHLVKFMEHVSKLLMDRQMEPA-SSEKLLEAFETLDPENKKYLTKEYFGKLMAEEGEPFSAEELD 130
                :|:.     ||.|:|:.. |.|:|.|||...|.:...:::......:|...||..|.||:|
plant    68 ----EFLN-----LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVD 123

  Fly   131 AMWPVAIDPITGHIPYTFYINQLRHK 156
            .|...|.....|.|.|..::..:..|
plant   124 EMIREADVDGDGQINYEEFVKVMMAK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9406NP_611552.1 PTZ00184 7..156 CDD:185504 47/154 (31%)
CAM6NP_850860.1 PTZ00184 1..149 CDD:185504 47/154 (31%)

Return to query results.
Submit another query.