DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9406 and cetn2

DIOPT Version :10

Sequence 1:NP_611552.1 Gene:CG9406 / 37405 FlyBaseID:FBgn0034592 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001017149.1 Gene:cetn2 / 549903 XenbaseID:XB-GENE-967617 Length:172 Species:Xenopus tropicalis


Alignment Length:141 Identity:38/141 - (26%)
Similarity:68/141 - (48%) Gaps:16/141 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VGVT-----------LNNELEEKISEAFCIFDTHGDKYIDSRNVGNVLRFLGCAPTEKEVEDVIK 56
            :|||           |..|.:::|.|||.:|||.|...||.:.:...:|.||..|.::|::.:|.
 Frog    10 LGVTTQRKKPVPKPELTEEQKQEIREAFDLFDTDGAGTIDVKELKVAMRALGFEPKKEEIKKMIA 74

  Fly    57 ATDSVDYPGEAHLVKFMEHVSKLLMDRQMEPASSEKLLEAFETLDPENKKYLTKEYFGKLMAEEG 121
            ..|. :..|:.....||..:::    :..|..|.|::::||...|.:....::.:...::..|.|
 Frog    75 DIDK-EGTGKISFGDFMSAMTQ----KMAEKDSKEEIMKAFRLFDDDETGKISFKNLKRVAKELG 134

  Fly   122 EPFSAEELDAM 132
            |..:.|||..|
 Frog   135 ENLTDEELQEM 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9406NP_611552.1 PTZ00184 7..156 CDD:185504 35/126 (28%)
cetn2NP_001017149.1 PTZ00183 16..172 CDD:185503 35/135 (26%)

Return to query results.
Submit another query.